Gene Smed_0703 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0703 
Symbol 
ID5321540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp758891 
End bp759859 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content68% 
IMG OID640789640 
Producthypothetical protein 
Protein accessionYP_001326394 
Protein GI150395927 
COG category[R] General function prediction only 
COG ID[COG4111] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.703298 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.693956 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGGTG AAGGGCCGCC GGGCACGGTG GAGATCGGGC TCAATGCGGT GATCGTTGCG 
GTTGTCAGCC GCAGCCCTCG CATCCTCGCC GTCAGCGAGC CGGACGGCGA CGCGCGCGAC
AGCCTGCCTT TCGGACCCTT CGACCCGGCC CGCCACCGCA CCTTCGAGGC AAGCCTGCGC
GCACGCGTCG AGAAGCGGAC CGCCCTCAAG CTCGGCTATA TCGAACAGCT CTATACTTTC
GGTGACCGTG GGCGCCAGCG GCTGCCCGGC GAGGAAGGCA AGCACATGGT TTCCGTCGGC
TATCTGGCGC TGACGCGCAC CGACGCCGAA AATACCGAGC GGCTGGCCGG CGCTGGTGCC
CACTGGCGGG ACTGGTACGG CTATCTTCCC TGGGAGGACT GGAGGCTCGG GCGTCCAGCG
ATACTCGACC GGACTATCCT GCCGGCGCTT GCCCGCTGGG AGTCGGGCGA CGAAAAGCCG
GCGGCGGCGC AGCGCCGTTC GAGAATACGC CTCGCCTTCG GCCTTGACGA TTTTCCCTGG
GACGAAGAGC GGGTGCTGGA GCGCTACGAA CTGCTCTACG AGGCCGGGCT GGTGCGCGAA
GCAGTGATCG ACGGCCATTG CCGCGACCTG GAGCCTCCGG CGGCAGGGCT GGCGATGCGG
CACGACCATC GGCGAATCGT CGCGACCGCG GTCGCGAGGC TTCGCGGCAA GCTCAAATAT
CGGCCGGTGG TTTTCGAATT GATGCCGCCG GCGTTCACGC TTACGGACCT GCAGGCAACC
GTGGAAGCGA TCTCCGGGCG CCATCTCCAC AAGCAGAATT TTCGCCGCCT TGTCGAGGGA
GCGGAACTCG TCGAGCCAAC CGGAGAAACC CTGGCGTCCA CCGGCGGACG CCCGGCTGCA
CTCTTCCGCT TTCGCCGCCA GATCCTGGAC GAGCGACCCG CGCCGGGTCT CAAGGTCGGC
GGGCGCTGA
 
Protein sequence
MSGEGPPGTV EIGLNAVIVA VVSRSPRILA VSEPDGDARD SLPFGPFDPA RHRTFEASLR 
ARVEKRTALK LGYIEQLYTF GDRGRQRLPG EEGKHMVSVG YLALTRTDAE NTERLAGAGA
HWRDWYGYLP WEDWRLGRPA ILDRTILPAL ARWESGDEKP AAAQRRSRIR LAFGLDDFPW
DEERVLERYE LLYEAGLVRE AVIDGHCRDL EPPAAGLAMR HDHRRIVATA VARLRGKLKY
RPVVFELMPP AFTLTDLQAT VEAISGRHLH KQNFRRLVEG AELVEPTGET LASTGGRPAA
LFRFRRQILD ERPAPGLKVG GR