| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0701 |
|---|
| Symbol | |
|---|
| ID | 5321538 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 757296 |
|---|
| End bp | 758195 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640789638 |
|---|
| Product | nicotinate-nucleotide pyrophosphorylase |
|---|
| Protein accession | YP_001326392 |
|---|
| Protein GI | 150395925 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0157] Nicotinate-nucleotide pyrophosphorylase |
|---|
| TIGRFAM ID | [TIGR00078] nicotinate-nucleotide pyrophosphorylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.040003 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCC TTCGCCCCGA ACTGCCCGTC CTCATGCTCG AGGAGCAGGT GAAAGCCGCC
CTTCTCGAAG ATCTCGGCCG GGCTGGTGAC ATCACCACGC TCTCGACGAT CGGACCGGAC
CGGAAGGCGA GCGCCGAAAT GAGCGTGCGC GAAGCGGGCG TCGTGGCCGG GCTGGACCTG
GCCCGGACCG CCTTCCGCCT GATCGATCCG TCTATCCGCT TCGAAGCGGT CGCCGCGGAT
GGCGATCGCG TGGCGTCAGG TGCGACGATT GCGCGAATTT CCGGCCGTGC CCGGGGGATT
CTGTCCGCCG AGCGGGTGGC ACTCAACTTT CTCATGCATC TTTCGGGAGT CGCGACCTAC
ACGGCCTCTT TCGCCGATGA GATCGCCCAT ACCGGGGCCA GGGTCTGCTG CACGCGCAAG
ACGATCCCCG GGCTTCGCGC GCTCGAAAAA TACGCCGTCC GCCTCGGTGG CGGCTCCAAT
CATCGTTACG GTCTCGACGA CGCGGTGCTG ATCAAGGATA ACCATATTGC CGTTTCCGGC
GGGGTTGCCG GCGCCATACG GGCCGCCCGG GCTTACTGCG GCCATCTCGT TAAGGTCGAA
GCCGAAGTGG ATGGGCTTGC GCAGCTGCGC GAAGCCTTGA CCGCCGCTCC GGATGTGATC
CTGCTCGACA ATATGGGACC GGAACTGCTC GGCGAAGCCG TCGCAATCAA TGCGGCGCAT
TGGGGGCTTA CCTCCGCTTC CTACGCCGGC GACCTGCGCC GCACCAGGCT CGAAGCATCC
GGAAATGTGA GGATCGAAAC CATTCGGGCA ATTGCCGAAA CGGGCGTGGA CTACATCTCG
ACATCGAAGA TCACGATGGC CGCGCCGACG CTCGACATCG GTCTGGACGT GTCGATTTAG
|
|---|
| Protein sequence | MTALRPELPV LMLEEQVKAA LLEDLGRAGD ITTLSTIGPD RKASAEMSVR EAGVVAGLDL
ARTAFRLIDP SIRFEAVAAD GDRVASGATI ARISGRARGI LSAERVALNF LMHLSGVATY
TASFADEIAH TGARVCCTRK TIPGLRALEK YAVRLGGGSN HRYGLDDAVL IKDNHIAVSG
GVAGAIRAAR AYCGHLVKVE AEVDGLAQLR EALTAAPDVI LLDNMGPELL GEAVAINAAH
WGLTSASYAG DLRRTRLEAS GNVRIETIRA IAETGVDYIS TSKITMAAPT LDIGLDVSI
|
|---|
| |