Gene Smed_0698 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0698 
Symbol 
ID5321535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp753031 
End bp754269 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content63% 
IMG OID640789635 
Productmajor facilitator transporter 
Protein accessionYP_001326389 
Protein GI150395922 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2807] Cyanate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.733103 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.933566 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCCG TTTCTCCCGC AGTCACCCGG CCACTCGATC GCAGCGGCTT GCCCTGGCTC 
ATCATCGTCG CCGGCTCCAT CATCGCGATG CTGACCTTCG GTCCGCGCTC CGCCATGGGC
TTCTTCCAAC TGCCGATGCT TGCCGAAAAG GGCTGGGACC GGACGACCTT CGGCCTCGCA
ATGGCGTTTC AAAATCTCTG TTGGGGCCTT GGCCAACCGG TCTTCGGCGC GATCGCCGAC
AAGTTCGGCA CCTGGCGCGT GCTCGCGCTT TCCGGCATCG TCTACGCGGC AGGCCTGATC
CTGATGGCCT TCGCGGATGC GCCGATCTGG CTGCATATTG GAGGCGGCGT TCTGGTCGGT
CTCGGGGTTG CGTCCGGCTC CTTCGGCATC GTGCTTTCCG CATTCGCGCG CAATGTCGTG
CCCGAGCAGC GTTCGCTCGC CTTCGGCATA GGCACCGCCG CCGGCTCGGC CGGCATGTTC
CTCTTCGCGC CGCTGAGCCA GGGCCTCATC TCCGCCTATG GCTGGTCAGA CAGTCTCGTC
TACCTCGGGC TCTTGATGCT GCTCGTCCCT CTCTTCGCGA TTCCGTTGCG CGGCAATGCC
GCTTCCGGCA GCCAGTCGGC GACGATGTAC AAGCAGACGG TCCGCGAAGC GCTTAGGGAA
GCACTCGGTC ACAAGAGCTA TCTTCTGCTC GTCTCGGGCT TCTTCGTCTG CGGCTATCAG
GTCGCTTTCA TCACCGCGCA TTTTCCGGCC TATATCGGCG ATCTAGGCAT CGATGCCCGT
TATGCTGTGA TCGCGCTGGC ATTGATCGGC TTCTTCAACA TTATCGGCTC GTTCTCGGCC
GGCCTGATCG GTCAGCGCTA TTCGAAGCCC TATTTTCTGA CGCTGATCTA TCTTGCCCGC
TCGGTCGCGG TTTCGGCCTT CCTGCTGCTG CCGCAGACGC CGACCTCGGT CATCGTCTTC
GCGGTCGTTA TGGGCCTGTT GTGGCTGTCG ACGGTGCCGC CGACCAATGG ACTGGTGGCG
ATCATGTTCG GAACGCGGCA TCTGGGCCTG CTTGGCGGCA TCGTCTTCCT GTCGCACCAG
ATCGGTTCAT TCCTGGGCGT GTGGATGGGC GGATATCTTT ACGACCGATT CGGCTCCTAC
GATCCTGTCT GGTGGGTGGG TGTCGCGCTC GGCATCTTCG CGGCCATCGT TCACTGGCCG
ATCGAGGAGC GCGCCGTCGC ACGCCCGGCA ACAGCTTGA
 
Protein sequence
MSAVSPAVTR PLDRSGLPWL IIVAGSIIAM LTFGPRSAMG FFQLPMLAEK GWDRTTFGLA 
MAFQNLCWGL GQPVFGAIAD KFGTWRVLAL SGIVYAAGLI LMAFADAPIW LHIGGGVLVG
LGVASGSFGI VLSAFARNVV PEQRSLAFGI GTAAGSAGMF LFAPLSQGLI SAYGWSDSLV
YLGLLMLLVP LFAIPLRGNA ASGSQSATMY KQTVREALRE ALGHKSYLLL VSGFFVCGYQ
VAFITAHFPA YIGDLGIDAR YAVIALALIG FFNIIGSFSA GLIGQRYSKP YFLTLIYLAR
SVAVSAFLLL PQTPTSVIVF AVVMGLLWLS TVPPTNGLVA IMFGTRHLGL LGGIVFLSHQ
IGSFLGVWMG GYLYDRFGSY DPVWWVGVAL GIFAAIVHWP IEERAVARPA TA