| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0682 |
|---|
| Symbol | |
|---|
| ID | 5321519 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 733573 |
|---|
| End bp | 734289 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640789619 |
|---|
| Product | ribonuclease III |
|---|
| Protein accession | YP_001326373 |
|---|
| Protein GI | 150395906 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0571] dsRNA-specific ribonuclease |
|---|
| TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGGTC GCTCGTTGAA CGCGGAGGAC CGGGCGCGGC TTGAGGCTGC GATCGGTTAC
CAGTTCGCCG AGAAGGAACG TCTCGACCGG GCCCTGACAC ATTCGAGCGC GAGAAGCGGC
CGTGCAATCA ACTACCAGCG GCTCGAATTC CTTGGGGACA GGATTCTTGG GCTCTGCGTC
GCGGAGCTCC TGTTCCAGAC ATTCAGCGAT GCAAACGAAG GCGAGCTCTC GGTTCGCCTG
AATCAGCTCG TCAGCGCGGA GAGTTGCGCG AAAGTGGCCG ATGAGCTCTC ATTGCATGAA
TTCATCCGCA CTGGTTCGGA TGTGAAGAAG ATCACGGGCA AGCACATGAT GAATGTGCGT
GCCGATGTGG TAGAGTCGCT GATTGCCGCC ATCTATCTCG ATGGCGGCCT GGAGGCGGCG
CGGCGCTTCG TGCTCGAGCA TTGGACGCAT CGCGCTGCAA GTGCGGACGG CGCCAGGCGC
GACGCCAAGA CGGAACTGCA GGAATGGGCG CATGCCAGGT TCGGTGTGGC GCCGAAGTAC
CGAACTGAAG ATCGCTCCGG CCCGGATCAC GATCCGCGCT TTACCGTCAC GGTAGAGGTC
GACGGAATCG ACCCGGAGAC CGGGGTTGAT CGTTCCAAGC GCGGGGCCGA GCAGGTCGCG
GCCATGAAAT TGTTAGAACG CGAAGGTGTT TGGCAGAAAC GCTCTGCCGG AAATTGA
|
|---|
| Protein sequence | MKGRSLNAED RARLEAAIGY QFAEKERLDR ALTHSSARSG RAINYQRLEF LGDRILGLCV
AELLFQTFSD ANEGELSVRL NQLVSAESCA KVADELSLHE FIRTGSDVKK ITGKHMMNVR
ADVVESLIAA IYLDGGLEAA RRFVLEHWTH RAASADGARR DAKTELQEWA HARFGVAPKY
RTEDRSGPDH DPRFTVTVEV DGIDPETGVD RSKRGAEQVA AMKLLEREGV WQKRSAGN
|
|---|
| |