| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0677 |
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| Symbol | |
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| ID | 5321514 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 728903 |
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| End bp | 731128 |
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| Gene Length | 2226 bp |
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| Protein Length | 741 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640789614 |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | YP_001326368 |
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| Protein GI | 150395901 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCGCC AATACGAGCT CGTCGAGCGC GTGCAGAAAT ACAAGCCCGA CGTCAACGAG
GCCCTGCTGA ACAAGGCCTA TGTTTACGCC ATGCAGAAGC ATGGGCAGCA GAAGCGGGCA
AGCGGCGATC CCTACATCTC CCATCCCCTG GAGGTCGCGG CGATCCTGAC CGAAATGCAT
CTCGACGAAT CCACGATAGC CGTCGCGCTG CTGCACGACA CGATCGAGGA TACGACCGCG
ACGCGACAGG AAATCGACGG CCTCTTCGGC GAAGATATCG GTGCCTTGGT CGAAGGTCTC
ACCAAGATCA AGAAACTCGA CCTCGTCACC AAGAAGGCCA AGCAGGCGGA AAATCTGCGC
AAGCTGCTGC TCGCTATTTC GGACGACGTC CGCGTCCTCC TGGTCAAGCT CGCCGATCGC
CTCCACAATA TGCGTACGCT CGATCACATG TCGGCGGAAA AGCGCGCGCG CATTTCGGAG
GAGACGATGG ACATCTATGC GCCCCTGGCG GGGCGCATGG GCATGCAGGA TATGCGCGAG
GAGCTTGAAA ACCTCTCCTT TCGGCACATC AACCCGGAAG CCTACGAAAC CGTCACCAGA
CGCCTTCAGG AGCTCTCCGA ACGTAACGAA GGGCTGATCA AGAAGATCGA GGAGGAACTG
AGCGAATTGC TTCAGGCGGA GGGGCTTGCC GATGCCCAGG TCAAGGGGCG CCAGAAGAAG
CCTTACTCGG TTTTCCGCAA AATGCAGTCG AAATCGCTTT CCTTCGAGCA GCTCTCGGAC
GTCTGGGGCT TCCGTATCAT CGTCAGCGAC ATTCCGGCCT GCTATCGCGC GCTGGGTATC
GTGCACACCC GCTGGCGCGT CGTGCCCGGA CGCTTCAAGG ACTATATCTC GACGCCGAAG
CAGAACGACT ATCAATCCAT TCATACGACG ATCATCGGTC CGTCGCGCCA GCGCATCGAA
CTGCAAATCC GCACGAAGCG CATGCATGAG ATCGCCGAAT ACGGTATCGC GGCCCACGCA
CTCTACAAGG ATCGCGACAC TGTTTCCGGC GACCTGACGC GCACACCGAC ATCGAACGCC
TATTCCTGGC TGCGCCGCAC GATCGAATCT CTCGCCGAGG GTGATAATCC GGAGGAGTTC
CTCGAGCACA CCAAGCTCGA ACTCTTCCAG GATCAGGTCT TCTGCTTCAC TCCGAAGGGG
CAGCTGATAG CATTGCCGCG CGGTGCCACC CCGATCGACT TCGCCTATGC CGTGCATACG
AATATCGGCG ACACCTGCGT CGGGGCCAAG ATCAACGGTC GCATCATGCC CCTGGTGACG
CGGCTCAACA ATGGCGATGA AGTGGAGATC ATCCGTTCGG GCATTCAGGT GCCGCCGCCG
GCCTGGGAAG AGATCGTCGT CACGGGCAAG GCTCGGGCGG CCATCCGCCG CGCTACTCGC
GCCGCGATCC GCAAGCAATA TGCCGGCCTC GGCTATCGCA TCCTGGAGCG CACTTTCGAA
CGGGCAGGGA AGACGTTCTC GCGCGAGGCG TTGAAGCCGG TGCTGCATCG GCTCGGGCAA
AAGGACGTGG AAGACGCCAT CGCTGCGGTA GGACGCGGCG AACTCTCCTC GCTCGACGTT
CTGCGCGCCG TCTTCCCGGA TCATCAGGAC GAGCGCGTGA CCGTGAAGCC TAGCGCCGAT
GACGGCTGGT TCAACATGCG CAGCGCCGCA GGCATGATCT TCAAGCTGCC GGAGCGGTCG
AAGGAAATGG CCGCCGCAGA GCAGGCGGAA GGCCCCGAAG CTCTCCCGAT CCGCGGCCTG
TCCGGCAATG CCGAGGTCCA CTTCAGTCCT GCCGGCGCCG TTCCCGGAGA TCGCATCGTC
GGTATTATGG ACAAGGACAA AGGCATCACC ATCTATCCGA TCCAGTCGCC GATCCTGCAG
CAGTTCGACG AGCAGCCCGA GCGCTGGATC GACGTTCGTT GGGATCTCGA CGAGGCGAAC
AACAGCCGTT TCATTGCCAG AATTGCGGTC AGCGCCTTGA ACGAGCCGGG TACGCTGGCG
GAGGTCGCAC AGGCGATCGC GACCACCGAT GTCAACATCC GCTCCCTATC GATGGGGCGC
GTCGCGGCTG ATTTCAGCGA ATTGCAGTTC GACCTCGAAG TCTGGGATCT GCGTCAGCTC
AATCACCTGA TGGCGCAACT CAAGGAATTG CCAAGCATTT CCATGGTCAA GCGCCTCTTC
GAGTAG
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| Protein sequence | MMRQYELVER VQKYKPDVNE ALLNKAYVYA MQKHGQQKRA SGDPYISHPL EVAAILTEMH
LDESTIAVAL LHDTIEDTTA TRQEIDGLFG EDIGALVEGL TKIKKLDLVT KKAKQAENLR
KLLLAISDDV RVLLVKLADR LHNMRTLDHM SAEKRARISE ETMDIYAPLA GRMGMQDMRE
ELENLSFRHI NPEAYETVTR RLQELSERNE GLIKKIEEEL SELLQAEGLA DAQVKGRQKK
PYSVFRKMQS KSLSFEQLSD VWGFRIIVSD IPACYRALGI VHTRWRVVPG RFKDYISTPK
QNDYQSIHTT IIGPSRQRIE LQIRTKRMHE IAEYGIAAHA LYKDRDTVSG DLTRTPTSNA
YSWLRRTIES LAEGDNPEEF LEHTKLELFQ DQVFCFTPKG QLIALPRGAT PIDFAYAVHT
NIGDTCVGAK INGRIMPLVT RLNNGDEVEI IRSGIQVPPP AWEEIVVTGK ARAAIRRATR
AAIRKQYAGL GYRILERTFE RAGKTFSREA LKPVLHRLGQ KDVEDAIAAV GRGELSSLDV
LRAVFPDHQD ERVTVKPSAD DGWFNMRSAA GMIFKLPERS KEMAAAEQAE GPEALPIRGL
SGNAEVHFSP AGAVPGDRIV GIMDKDKGIT IYPIQSPILQ QFDEQPERWI DVRWDLDEAN
NSRFIARIAV SALNEPGTLA EVAQAIATTD VNIRSLSMGR VAADFSELQF DLEVWDLRQL
NHLMAQLKEL PSISMVKRLF E
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