| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0658 |
|---|
| Symbol | |
|---|
| ID | 5321494 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | - |
|---|
| Start bp | 711165 |
|---|
| End bp | 712667 |
|---|
| Gene Length | 1503 bp |
|---|
| Protein Length | 500 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640789594 |
|---|
| Product | AMP nucleosidase |
|---|
| Protein accession | YP_001326349 |
|---|
| Protein GI | 150395882 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0775] Nucleoside phosphorylase |
|---|
| TIGRFAM ID | [TIGR01717] AMP nucleosidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.914064 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAAC GAATCTCTTC GAACGCCGTC CTCTCCGTCG CCACCCCCGA TGCCTTCGAG
CCGCAGCTCT TCGATGATCC GGCGGGGGCC GTCGATTGTC TGGAAGCACT TTACGAACGC
AATACCCGCT TCCTTTGCCA AGCCTTCGAG GGTCTCGGAA AAGCCGGCAG GCCACTCACC
CGTTTCCGCG CCTGCTATCC GCAGGTCAGC ATTGAAACCA GCAGCTTCGG ACATGTCGAT
TCGCGGCTTT CCTTCGGCTA TGTGAGCGCG CCCGGCGTCT ACACGACAAC CATTACGCGG
CCCAAGCTGT TCCGGCACTA TCTGAAGGAA CAGCTCGGTC ATCTGATGCG TAACCACGGC
GTTGGCGTGA CGGTGTCGGA ATCCTCGACA CCGATCCCGC TCCATTTCGC ATTCGGCGAA
GGAGCGCATG TCGAACCGTC GGCGGCCGAA GGCATCGACA TTCCGCTGCG CGACCTTTTC
GACGCACCGG ATCTTACGAC AACGGACGAC GAGATCGCCA ACGGCTCCTA CGAGCCGGGA
CCGGGAGAAC CGTCGCCGCT CGCGCCGTTC ACGGCGCAAC GCATCGACTA CTCGCTCGCG
CGCCTCAGCC ACTATACCGC GACCAGCGCC AGGCACTTCC AGAACTTCGT GCTCTTCACG
AATTATCAGT TCTATGTCGA CGAGTTCTGC GCCTGGGCAC GCCAGCAGAT GGCCGAAGGC
GGCAACGGCT ATACCGCCTT CATCGAACCG GGCAATATCA CCACTTCGGC CGGCGCTGAT
CGGCCGGATG CCGACTATTC TCTCGCCCGT CTGCCGCAGA TGCCTGCCTA CCATTTGAAG
AAGAAGGGAC ATGGCGGCAT CACTCTGGTC AATATCGGCG TCGGGCCCTC CAATGCCAAG
ACGATCACAG ACCACATAGC CGTGTTGAGA CCGCATGTCT GGCTGATGCT CGGCCATTGC
GCGGGGCTTC GCAACAGCCA GCGACTCGGC GATTACGTGC TGGCGCATGC CTATATGCGC
GAGGACCATG TGCTCGACGA CGACCTGCCG GTGTGGATCC CCCTGCCCGC ACTGGCCGAG
GTGCAGGTTG CGCTTCAGGA TGCCGTCGCC GAGGTGACGG GTTACAAGGG GTACGACCTG
AAGCAGATCA TGCGCACGGG CACGGTCGCT ACGATCGACA ACCGCAACTG GGAATTGCGC
GACCAGCGTG GCCCGGTCAA GCGCCTCTCG CAGGCACGAG CCATTGCCCT CGATATGGAA
TCGGCCACGA TAGCGGCCAA CGGGTTCCGC TTCCGCGTCC CCTACGGGAC ATTGCTCTGC
GTGTCCGACA AGCCGTTGCA CGGCGAATTG AAGCTGCCCG GAATGGCAAG TGCCTTCTAT
CGAACCCAGG TAAGCCAGCA TCTGAAGATC GGCATTCTGG CGCTGCAGAA ACTGGCGGCA
ATGCCATCCG AGAAGCTGCA TTCACGTAAG CTCAGAAGCT TTTACGAAAC CTCGTTCCAG
TAG
|
|---|
| Protein sequence | MNKRISSNAV LSVATPDAFE PQLFDDPAGA VDCLEALYER NTRFLCQAFE GLGKAGRPLT
RFRACYPQVS IETSSFGHVD SRLSFGYVSA PGVYTTTITR PKLFRHYLKE QLGHLMRNHG
VGVTVSESST PIPLHFAFGE GAHVEPSAAE GIDIPLRDLF DAPDLTTTDD EIANGSYEPG
PGEPSPLAPF TAQRIDYSLA RLSHYTATSA RHFQNFVLFT NYQFYVDEFC AWARQQMAEG
GNGYTAFIEP GNITTSAGAD RPDADYSLAR LPQMPAYHLK KKGHGGITLV NIGVGPSNAK
TITDHIAVLR PHVWLMLGHC AGLRNSQRLG DYVLAHAYMR EDHVLDDDLP VWIPLPALAE
VQVALQDAVA EVTGYKGYDL KQIMRTGTVA TIDNRNWELR DQRGPVKRLS QARAIALDME
SATIAANGFR FRVPYGTLLC VSDKPLHGEL KLPGMASAFY RTQVSQHLKI GILALQKLAA
MPSEKLHSRK LRSFYETSFQ
|
|---|
| |