| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0654 |
|---|
| Symbol | |
|---|
| ID | 5321490 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 706579 |
|---|
| End bp | 707505 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640789590 |
|---|
| Product | diacylglycerol kinase catalytic region |
|---|
| Protein accession | YP_001326345 |
|---|
| Protein GI | 150395878 |
|---|
| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.537224 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAAAGTCA AGGCCATCTT CAATCGAGAT GGGGGGACTT TTCGAACGAC GGACATGGAC
GCCTTCAGCA GGAAGGTCGA GGAGGACTTT CAGGCTGCCG GTCATCGGAT TGAGATCGCA
GTCGTCGGAT CGGACGAGAT GCGAGATGCA CTGGAGACTG CCTGCCGAAG GGATGATCTC
GACGCGATCG TCGCCGGCGG CGGTGACGGC ACGATTTCGG CGGCGGCGGG AGTCGCCTGG
AAAACAGGCA TGCCGCTCGG CATCGTCCCC GCGGGAACTA TGAATCTCGT TGCGCGTTCC
CTGAAGCTTC CGCTCGACAT CTGGAAGGCT CCGGAAGTGC TTGCGGCTGG AAGAGTCATC
GACGCCGACA TCGGCAGCGC TGACGGTCGC GCGTTCGTGC ATCAGTTCTC CATGGGTCTT
CACGCCCGCA TGGTGCGCTA TCGCGAATCC TATCAATTCG CGTCGCGACT TGGAAAGATC
AGCGCCAGCA CACGCGCCGC TATCGGTGTG ATTTTCAATC CACCGGATTT CGAGATTGAG
TTCGACGCGG ACGGGCACCG GGAGCGCCGG CATGTTTCGG CGATTTCCGT CTCGAACAAC
CATTTCGGCC ATGACACGCT GATGTATGCG GACGATCTGA CGAGCGGCCA TCTCGGCTTC
TACACGGCGC CGCCTCTAAG CCCCGCGGGC GTGACGAAGC TCTCCTTCGA TATTCTTCGG
GGAAAATTCA GAAGCAGCAC GCTGATCAGC GAGATGAGTG CCCTGACAGT AGATCTGCAC
TTCCCGAAAA TGGATAGGAA GATCAATTGC GTCATCGACG GCGAACTCGT TCCGATCAAA
AGCGGTAAGG TGGCGTTGCG CGTTCATCCT GGAGAATTGA AGCTGCTCGT CGGCCGGCAG
GATGGCGACG CCGGGAATAC CGTGTAG
|
|---|
| Protein sequence | MKVKAIFNRD GGTFRTTDMD AFSRKVEEDF QAAGHRIEIA VVGSDEMRDA LETACRRDDL
DAIVAGGGDG TISAAAGVAW KTGMPLGIVP AGTMNLVARS LKLPLDIWKA PEVLAAGRVI
DADIGSADGR AFVHQFSMGL HARMVRYRES YQFASRLGKI SASTRAAIGV IFNPPDFEIE
FDADGHRERR HVSAISVSNN HFGHDTLMYA DDLTSGHLGF YTAPPLSPAG VTKLSFDILR
GKFRSSTLIS EMSALTVDLH FPKMDRKINC VIDGELVPIK SGKVALRVHP GELKLLVGRQ
DGDAGNTV
|
|---|
| |