Gene Smed_0634 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0634 
Symbol 
ID5321470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp679510 
End bp679962 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content62% 
IMG OID640789570 
Productcytochrome c-type biogenesis protein CcmE 
Protein accessionYP_001326325 
Protein GI150395858 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2332] Cytochrome c-type biogenesis protein CcmE 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0361156 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGCA AGCAGAAACG ATTGGCAATC ATCGGAGGTG GCGTCGGATT TCTGACGGCG 
GCGGTCCTGC TCGTCATGTT CGCTTTTAGC CAGGCGGTCG CCTATTTCTA CGTCCCGGGA
GATCTTACGA AAGCCGACGT CGCGCCGGGG ACGCGTATCC GCCTCGGCGG GCTTGTCGAG
GCAGGCTCCG TCAAACGCGG CGAGGGCAGG ACCATTACCT TCAAGGTGAC GGATACGCTT
GCGACCGTTC CGGTGACCTA TACGGGTATC TTGCCCGACC TCTTCCGCGA GGGGCAGGGC
GTCGTGGCCG AGGGTGCCTT CGTCGGCGGC AGCCCGGTTT TCGTTGCGGA CACCGTGCTC
GCCAAGCATG ATGAGACCTA CATGCCGAAG GATGTCGCAG ATCGCCTCAA GGCCCAGGGG
GTCACGCTTG GCGGGGAGGA AAACATCCGA TGA
 
Protein sequence
MTRKQKRLAI IGGGVGFLTA AVLLVMFAFS QAVAYFYVPG DLTKADVAPG TRIRLGGLVE 
AGSVKRGEGR TITFKVTDTL ATVPVTYTGI LPDLFREGQG VVAEGAFVGG SPVFVADTVL
AKHDETYMPK DVADRLKAQG VTLGGEENIR