Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0617 |
Symbol | |
ID | 5321453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 664192 |
End bp | 665769 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640789553 |
Product | histidine kinase |
Protein accession | YP_001326308 |
Protein GI | 150395841 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.862925 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGGCA AATGGTTATC CCTCGTGGAT GACGCGGCCG CACCTTGGCT GCCACGCAGC GTTCTCGCCC CGGCAATCGT ACGTCATGAC TTCAGACGCC TGCGCACCGT CGCTGCCGTG TCCTTGACCG CGCTGCCGAT CATCCCCCTC GCGCTGACGC TGGCACTGCC CGTATCCGCC GCGCTGCCGG CGGGAGCGGC GCTTTGGGCG TCGGCCTCCC TGTTGGCCGC AGCGGCGGCT ATTTCCGGCG GCCGTGCCGA GCCGATCGTC GCTGAGGTGG AAGTGGCGCC TGCGCCGGGC CTGCCAGACC TCGATACAGC CTATGATCTG TTTGCGGGGT TGGTGACTGT CCACGATATC AGGGGCCACG TCCGGTCAGT ACACGGCCGC GACGCCCGCG AATATCTGAA ACTGATGCGC GATCCGCAGG GGCGCGGCTT CATCGAGCAG ATTCACGTTT CGGATCGTAT CGCTTTCCTG CGAGCGATCG ATTCACTGCG CCTCGACAGC GAGCGCACGG CTGTGGACAT TCGTCTCGAA CGGACGTCGG CGGATGGTCC CCAATTCGCT CATTTCTATT GCGAGATGAC GCCCCTTCGG GACGCTGAAG GAAATCTCCT CGCGATTGTC GCCCAGTCGC GCGATGTCTC CGAAGGCGCG CGTTTGCAGG CGGAGGCGGC AGCCAGGGCC GCGCACGCCG AGTCCGCAAA CGATGCCAAG ACCCGGTTCC TTGCCGCGGT CAGCCACGAA TTGCGCACGC CGCTCAATGC CATTCTCGGT TTTTCCGACG TTCTTGCCGG TGAATATTTC GGGAAACTCG AAAACGATCG CCAGCGCGAA TATGTGTCGC TGATCCACCA GTCCGGCACG CATCTTCTCT CGGTCGTCAA CACGATGCTC GACATGAGCA AGATCGAAGC GGGCCGCTAC GAGCTTCTCC GCGAACCTTT CCGCGTCGCC GAGGCCATCG CCGCATGCGA GGCGATGCTG TCGCACCAGG CGCGCGAGAA GGGTGTGCGA CTGGCGAGCC GGGTTACCCG TTCGGTTGGC GAAATCAATG CAGACCAGCG CGCCGTCCAG CAAATTCTCA TCAATCTCGT TGGTAACGCG ATCAAGTTTA CCGACCGGGG TGGGCTTGTC ACCGTCGATG CCGCCCGGGA AGGCGCCTTG CTGAAGCTTA CGGTCAGTGA TACCGGAATC GGCATCGCCG CGGACAAGCT GAAGATGCTT GGCCAACCTT TTGTCCAGAT TCAGAATGAT TATACCCGCC GCTACGAGGG AACGGGACTT GGGCTGTCTC TGGTGAAGGG ACTTGCCGAA CTGCATGGCG GCGACGTTTC GATCCGTAGC GCCGAGGGTG AGGGCACCGA GGTCGTGGTC TCCATTCCCT GCGATGTTTC GAGCATTGCC GGAGCGGAAT GCGCGCGCGT GCCTGTCACG GTGGAGTTTC CGCCGCGGTT GACGCTGCGC GGCGACGGAA AAAGCGATGT TGGTGAGCCG GCCGTGGTCG AGGCTCTCCG CAAAGGAGAA ATGGGTCGGG AAGGGGGACA TGGCACCGCG CAAGCGAAAA CAGCCTGA
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Protein sequence | MAGKWLSLVD DAAAPWLPRS VLAPAIVRHD FRRLRTVAAV SLTALPIIPL ALTLALPVSA ALPAGAALWA SASLLAAAAA ISGGRAEPIV AEVEVAPAPG LPDLDTAYDL FAGLVTVHDI RGHVRSVHGR DAREYLKLMR DPQGRGFIEQ IHVSDRIAFL RAIDSLRLDS ERTAVDIRLE RTSADGPQFA HFYCEMTPLR DAEGNLLAIV AQSRDVSEGA RLQAEAAARA AHAESANDAK TRFLAAVSHE LRTPLNAILG FSDVLAGEYF GKLENDRQRE YVSLIHQSGT HLLSVVNTML DMSKIEAGRY ELLREPFRVA EAIAACEAML SHQAREKGVR LASRVTRSVG EINADQRAVQ QILINLVGNA IKFTDRGGLV TVDAAREGAL LKLTVSDTGI GIAADKLKML GQPFVQIQND YTRRYEGTGL GLSLVKGLAE LHGGDVSIRS AEGEGTEVVV SIPCDVSSIA GAECARVPVT VEFPPRLTLR GDGKSDVGEP AVVEALRKGE MGREGGHGTA QAKTA
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