Gene Smed_0611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0611 
Symbol 
ID5321447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp660550 
End bp661026 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content59% 
IMG OID640789547 
Productputative monovalent cation/H+ antiporter subunit E 
Protein accessionYP_001326302 
Protein GI150395835 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1863] Multisubunit Na+/H+ antiporter, MnhE subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTCC TGCTGACCAA CGTAATTTTC ACGCTGATCT GGGGAGCAAT CAGCGCCAGC 
TTCACGCCCG CGAACCTATT GCTGGGCTTC GCAGCCGGCG CCCTGTCGCT CTGGCTGATC
CGACGGGAGC TGCGCCCGGT GACTTATCCG TTGAGGCCCT TGCGGCTTCT GCTGCTCGCA
TTGCTGTTTT TCAGGGAGTT GGCGATCTCC GCAACCAAGG TCGCGATCCG GGTTCTGCGT
CCGAATATGG AACTGAAGCC CGGGATTTTT GCCTATCCGC TCGCGGTTAA CAGTGATTTC
GAGATAACGC TGCTCGCCAA CCTGATCACA CTGACGCCGG GAACTCTGTC GGTGGATGTC
TCCGAAGATC GCAAGACCCT CTATGTACAT GCGCTCGATT GCGCCGATCC GGCAGCCTTG
CGGCGAGACA TTGCCGGCGG CTTCGAGCGC CGAATCCGGG AGGCCTTCGA ACGATGA
 
Protein sequence
MKFLLTNVIF TLIWGAISAS FTPANLLLGF AAGALSLWLI RRELRPVTYP LRPLRLLLLA 
LLFFRELAIS ATKVAIRVLR PNMELKPGIF AYPLAVNSDF EITLLANLIT LTPGTLSVDV
SEDRKTLYVH ALDCADPAAL RRDIAGGFER RIREAFER