| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0604 |
|---|
| Symbol | |
|---|
| ID | 5321440 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 653610 |
|---|
| End bp | 653954 |
|---|
| Gene Length | 345 bp |
|---|
| Protein Length | 114 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640789540 |
|---|
| Product | TraR/DksA family transcriptional regulator |
|---|
| Protein accession | YP_001326295 |
|---|
| Protein GI | 150395828 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1734] DnaK suppressor protein |
|---|
| TIGRFAM ID | [TIGR02420] RNA polymerase-binding protein DksA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAAGT ACGCGTTGGA TGACTTTCGC GAACAGCTCT TGCGCCGCAA ACGCGAACTG
TATGGGCGGC TCGTGAAGAT CGAGGAGGAC CTCGAGCAGC CGATGAATGC AGACGTACCG
GATCGCGTAA CGGAACGGGA GAGCGACGAA GTTCTGGAAG GTCTCGGTCT CGCCGGTCAG
GGTGAGATCC GCGCCATTGA CGCCGCGCTC AACCGCATCG AAGCAGGAAC CTTCGGCATC
TGCGCGCGTT GTGGAGACGC AATTTCCCCG GAACGACTGC GCGCCGTGCC GCATGCGCCG
CTCTGCCAGA CCTGCGCCGC CGAGCTTGCG GCAAGCAGCC GGTAG
|
|---|
| Protein sequence | MDKYALDDFR EQLLRRKREL YGRLVKIEED LEQPMNADVP DRVTERESDE VLEGLGLAGQ
GEIRAIDAAL NRIEAGTFGI CARCGDAISP ERLRAVPHAP LCQTCAAELA ASSR
|
|---|
| |