Gene Smed_0584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0584 
Symbol 
ID5321420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp633195 
End bp634235 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content65% 
IMG OID640789520 
Productalcohol dehydrogenase 
Protein accessionYP_001326275 
Protein GI150395808 
COG category[R] General function prediction only 
COG ID[COG1064] Zn-dependent alcohol dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCGA TGTATTACGA TGCGTTCGAG AAGATGCCGG AAATCCGGAT ACTGCCCGAT 
CCGGTACCGA CCGAGAACGG CGTCGTCATC AAGGTCGAGG CGACCGGCCT TTGCCGCAGC
GATTGGCACG GCTGGATGGG GCATGACCCC GACATTCGTC TTCCGCATGT GCCGGGTCAT
GAACTGGCGG GCACGATCGC GGCGGTCGGG CGCGGGGTCC TCCGCTACAA GACCGGCGAC
AGGGTGACGG TGCCTTTCGT CTCCGGTTGC GGCCGCTGTT TCGAATGCCG CTCCGGCAAC
AACCAGGTTT GCGAGGCGCA GTTTCAACCG GGGTTCACCC ACTGGGGTTC GTTCGCGGAG
TATGTGGCGA TCGACTTCGC CGACCAGAAT CTCGTTCATC TCCCCGAGGA CATGGATTTC
GCCACGGCGG CAAGCCTCGG CTGCCGCTTC GCCACCTCTT TCCGCGCTCT CTTGGATCAG
GCCCGCGTGA AGGGCGGCGA GTGGGTGGCA GTGCACGGCT GTGGCGGCGT CGGACTCTCG
GCGGTCATGA TCGCAGCCGC ACTGGGCGCC AACCCGATCG CCATAGACAT CTCGGAGGAG
AAGCTCGCCT TCGCCCGGAA GCTCGGGGCG GTCGCCACCA TCAACGGCCG CGCGACCGAG
GATGTCGCGG GAGCCGTCAG GGACATCACC CGGGGTGGCG CCCATGTCTC GCTTGACGCG
CTCGGCTCAC CCGTCACCTG TTTCAACTCG ATCAAAAATC TGCGCCGCCG CGGCCGGCAC
GTCCAGGTCG GGCTTATGCT GGCGGAGCAT GCGACACCGC AGATCCCGAT GGCGCAGGTA
ATTGGACACG AGCTCGAGAT CTATGGCAGC CACGGAATGC AGGCCTGGCG TTACGAGGCG
ATGCTGGCAA TGATCACGGC CGGGCAGTTG AAGCCGCAAG AGCTGATCGG GCGCCAGATA
TCGCTTGAAG AGGCGGCGCC GGCGCTTGCG GCAATGGACG GTGCAACGGA GCTCGGCATC
AGCGTCATCA CGCGGTTCTG A
 
Protein sequence
MKAMYYDAFE KMPEIRILPD PVPTENGVVI KVEATGLCRS DWHGWMGHDP DIRLPHVPGH 
ELAGTIAAVG RGVLRYKTGD RVTVPFVSGC GRCFECRSGN NQVCEAQFQP GFTHWGSFAE
YVAIDFADQN LVHLPEDMDF ATAASLGCRF ATSFRALLDQ ARVKGGEWVA VHGCGGVGLS
AVMIAAALGA NPIAIDISEE KLAFARKLGA VATINGRATE DVAGAVRDIT RGGAHVSLDA
LGSPVTCFNS IKNLRRRGRH VQVGLMLAEH ATPQIPMAQV IGHELEIYGS HGMQAWRYEA
MLAMITAGQL KPQELIGRQI SLEEAAPALA AMDGATELGI SVITRF