Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0578 |
Symbol | |
ID | 5321414 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 627547 |
End bp | 629109 |
Gene Length | 1563 bp |
Protein Length | 520 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640789514 |
Product | protein of unknown function DUF853 NPT hydrolase putative |
Protein accession | YP_001326269 |
Protein GI | 150395802 |
COG category | [R] General function prediction only |
COG ID | [COG0433] Predicted ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.215105 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCAGG AAGGCAAGAT CTACATCGGA ACCAGCCGCA AGCCGGACGA TTCGATCAAT AAAGGCGAAT ATCTGGAGCT CAAATTCGGC AATCGCCACG GTCTGATCAC AGGCGCGACC GGGACCGGCA AGACCGTGAC GCTGCAAATC CTGGCCGAGG GTTTCTCGAA TGCCGGCGTA CCGGTATTCT GCGCCGACGT GAAGGGCGAC CTATCCGGCA TCGGCGCGAT GGGCGAGTCG AAGGACTTCC TGCTCAAGCG CGCGGAGCAG ATCGGCCTCG AGCCTTATGA TTTTCAGGAA TTTCCGGTGA TCTTCTGGGA TCTCTACGGC GAGAAGGGGC ACAGGGTCCG GACCACCATA TCGGAGATGG GGCCCCTCCT TCTGTCGCGG CTGATGAACG CGTCCGACGC CCAGGAAGGT GTGTTGAACA TCGCCTTCAA GATCGCCGAT GAGGGCGGAT TGCCGCTACT CGACCTCAAG GACCTGCGGG CGCTGCTCAA TTACATGGGC GAGAATGCAG GCGAGCTATC CAATCAGTTC GGCTTCATCT CCAAAGCCTC CGTCGGCTCG ATCCAGCGTG AACTCCTGAT CCTGGAACAG CAGGGGGCGG AGCATTTCTT TGGTGAGCCG GCACTGAAGA TCACCGACAT CATGCGGACC ACCAATGACG GGCGCGGCGC GATTTCGGTT CTTGCCGCCG ACAAGCTGAT GATGAACCCG CGGCTCTACG CAACCTTCCT GTTATGGCTC CTGTCAGAGC TTTTCGAGGA ACTTCCCGAA GTGGGTGACC CGGATAAGCC GAAGCTGGTG TTCTTCTTCG ACGAAGCGCA TTTGCTCTTC AATGATGCGC CCAAGGTCCT CGTCGAACGC GTCGAGCAGG TTGTCCGCCT GATCCGCTCG AAGGGCGTTG GCGTCTATTT CGTCACCCAG AACCCGCTCG ACGTCCCGGA GGCGGTCCTC GCCCAGCTTG GAAACCGTGT CCAGCATGCG TTGCGCGCCT ATTCCCCCCG CGAACAGAAG GCAGTCAAGA CGGCTGCCGA TACGTTCCGC CCCAACCCCG ACTTCAATTG CGCCGACGTG ATCACCAATC TCGGTACCGG CGAGGCTCTG GTTTCGACGC TGGAGGGCAA AGGCTCGCCG TCGATTGTCG AGCGGACCCT GGTGCGTCCG CCGGCGTCCC GGCTCGGTCC GCTTACCGAG GCCGAGCGGC AGCATGTCAT CAGCCTCAGC CCCGTGCGCG GCCTCTACGA TGAGGACTTC GACCGGGAGT CGGCCTATGA AATGCTTGCC AAGCGTGCGG CCAAGGCTGC GGAACAGGCG GAAGCAGCTC AGCGAGCAGA AGAACGGGCC TCTGAGGAGA CTTCCGGCGG CGGCCGTTGG ACACTGCCCG GCTTCGGCGA CGACGCGGCG GAAGCGCCGT CGGGCAAGCG GGCTAGGACG CGCTCTTCCG GCTACCAACG GGAAACCATC GTGGAGGCGG CGATGAAGTC CGTCGCGCGG ACGGTCGCGA CCCAGGTGGG ACGGGCTCTT GTCCGCGGCA TTCTCGGCAG TCTGAAGCGT TAG
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Protein sequence | MLQEGKIYIG TSRKPDDSIN KGEYLELKFG NRHGLITGAT GTGKTVTLQI LAEGFSNAGV PVFCADVKGD LSGIGAMGES KDFLLKRAEQ IGLEPYDFQE FPVIFWDLYG EKGHRVRTTI SEMGPLLLSR LMNASDAQEG VLNIAFKIAD EGGLPLLDLK DLRALLNYMG ENAGELSNQF GFISKASVGS IQRELLILEQ QGAEHFFGEP ALKITDIMRT TNDGRGAISV LAADKLMMNP RLYATFLLWL LSELFEELPE VGDPDKPKLV FFFDEAHLLF NDAPKVLVER VEQVVRLIRS KGVGVYFVTQ NPLDVPEAVL AQLGNRVQHA LRAYSPREQK AVKTAADTFR PNPDFNCADV ITNLGTGEAL VSTLEGKGSP SIVERTLVRP PASRLGPLTE AERQHVISLS PVRGLYDEDF DRESAYEMLA KRAAKAAEQA EAAQRAEERA SEETSGGGRW TLPGFGDDAA EAPSGKRART RSSGYQRETI VEAAMKSVAR TVATQVGRAL VRGILGSLKR
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