Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0575 |
Symbol | |
ID | 5321411 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 625670 |
End bp | 626353 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640789511 |
Product | ErfK/YbiS/YcfS/YnhG family protein |
Protein accession | YP_001326266 |
Protein GI | 150395799 |
COG category | [S] Function unknown |
COG ID | [COG1376] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.341386 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACCG ACCGCTTCCG CCAGCAGACA ATGCCGGTCT ACCGCAACCC TGCGCTGGAA AGCCGTTGGG GCCCGCCGGG CGGCATTTAT GAGGGGCCGG TGGGCGAGGG ACCGATCGGC TTGCCGCCCC AGGACGCCTA TTACGCAGAG ATCTATGCAG CGCAGGAGGA CGGGGGATTC CTCGTTCCGG CCGTGCCATT CAGGCAGATC GATCCGCGGT TCTATCGTCA GGAGGTCAGC GATCCTTTTG GCGAGGCTCC CGGCACGATC GTCGTCGACA CGGCCGACCG CTATCTCTAC CTGATCCAGC CGCGCGGGCG TGCGATGCGC TACGGCGTCG GCTTGGGCCG GGAAGGGTTT GCATGGTCGG GCCGCGGCGT GATTCAATGG AAGCAGAAAT GGCCCAAGTG GACGCCCCCG AACGAGATGG TGGCCCGTCA GCCGGTACTG GCGAAATATT CCGCGGATAA TGGGGGCATG CCCCCGGGCC TGGACAACCC GCTTGGGGCA CGCGCGCTTT ATATCTTCCA GAACGGTCAG GATACGCTCT ATCGTGTCCA TGGCTCGCCT GAATGGCAGT CGATCGGCAA AGCGGTGTCA TCGGGTTGCG TGCGCTTGAT CAACCAGGAC GTGATTGATC TTTATGATCG TGTGCGCAAC AAGTCGCCGA TCCTCGTCGT CTGA
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Protein sequence | MNTDRFRQQT MPVYRNPALE SRWGPPGGIY EGPVGEGPIG LPPQDAYYAE IYAAQEDGGF LVPAVPFRQI DPRFYRQEVS DPFGEAPGTI VVDTADRYLY LIQPRGRAMR YGVGLGREGF AWSGRGVIQW KQKWPKWTPP NEMVARQPVL AKYSADNGGM PPGLDNPLGA RALYIFQNGQ DTLYRVHGSP EWQSIGKAVS SGCVRLINQD VIDLYDRVRN KSPILVV
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