Gene Smed_0575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0575 
Symbol 
ID5321411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp625670 
End bp626353 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content63% 
IMG OID640789511 
ProductErfK/YbiS/YcfS/YnhG family protein 
Protein accessionYP_001326266 
Protein GI150395799 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.341386 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCG ACCGCTTCCG CCAGCAGACA ATGCCGGTCT ACCGCAACCC TGCGCTGGAA 
AGCCGTTGGG GCCCGCCGGG CGGCATTTAT GAGGGGCCGG TGGGCGAGGG ACCGATCGGC
TTGCCGCCCC AGGACGCCTA TTACGCAGAG ATCTATGCAG CGCAGGAGGA CGGGGGATTC
CTCGTTCCGG CCGTGCCATT CAGGCAGATC GATCCGCGGT TCTATCGTCA GGAGGTCAGC
GATCCTTTTG GCGAGGCTCC CGGCACGATC GTCGTCGACA CGGCCGACCG CTATCTCTAC
CTGATCCAGC CGCGCGGGCG TGCGATGCGC TACGGCGTCG GCTTGGGCCG GGAAGGGTTT
GCATGGTCGG GCCGCGGCGT GATTCAATGG AAGCAGAAAT GGCCCAAGTG GACGCCCCCG
AACGAGATGG TGGCCCGTCA GCCGGTACTG GCGAAATATT CCGCGGATAA TGGGGGCATG
CCCCCGGGCC TGGACAACCC GCTTGGGGCA CGCGCGCTTT ATATCTTCCA GAACGGTCAG
GATACGCTCT ATCGTGTCCA TGGCTCGCCT GAATGGCAGT CGATCGGCAA AGCGGTGTCA
TCGGGTTGCG TGCGCTTGAT CAACCAGGAC GTGATTGATC TTTATGATCG TGTGCGCAAC
AAGTCGCCGA TCCTCGTCGT CTGA
 
Protein sequence
MNTDRFRQQT MPVYRNPALE SRWGPPGGIY EGPVGEGPIG LPPQDAYYAE IYAAQEDGGF 
LVPAVPFRQI DPRFYRQEVS DPFGEAPGTI VVDTADRYLY LIQPRGRAMR YGVGLGREGF
AWSGRGVIQW KQKWPKWTPP NEMVARQPVL AKYSADNGGM PPGLDNPLGA RALYIFQNGQ
DTLYRVHGSP EWQSIGKAVS SGCVRLINQD VIDLYDRVRN KSPILVV