Gene Smed_0570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0570 
Symbol 
ID5321406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp619108 
End bp620118 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content65% 
IMG OID640789506 
ProductL-asparaginase II 
Protein accessionYP_001326261 
Protein GI150395794 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4448] L-asparaginase II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.878025 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAATC CCGTTCTGGT CGAAGTAACG CGCGGAAATC TGGTCGAAAG CCGCCATCGA 
GGCATGATCG TCGCCGTCGA TGCCGAGGGG AAGACACTGT TTTCGCTCGG TGAAGCGGAT
GCTCGCATCT TTCCGCGCTC GGCCTGCAAG GCAATGCAGG CCCTGCCGCT GATCGAAAGC
GGTGCCGCCG ACGCCTACGG GTTCGGGGAC CGGGAACTGG CACTTGCCTG CTCCTCGCAT
TCCGGGGAGT CGGAACATGT GGCGCTCGCC GCCTCGATGC TCGCGGCAGC GGGGCGGGAC
GTCCACGCGC TTGAATGCGG CGCCCATTGG TCCTCCGACC AGAAGACGCT GATCGCGCAG
GCGCGCTCCC TCGAAGCCCC AAGCGCACTC CACAACAATT GCTCCGGCAA GCATGCGGGC
TTTGTCTGTG CCTGCTGCCA TTCCGGCACC GAGGTCAAAG ATTATATCGG CTACGACCAC
CCGCTTCAGA AGGAGATCCG CGGGGTCATG ACGGAGCTGA CGGGAGCTGT CCTCGGTCGC
GACGACTGCG GCATCGATGG TTGCTCGATT CCGGCCTACG CGCTCTCGAT GAGGGGTCTT
GCCCGCGGCT TTGCAAAGAT GGCGAGCGGA GTCGGCCTCG GGACGGAGCG GGCCCGGGCC
TCGAAGCGTC TGATCGACGC CTGCATGGCC GAACCCTTTT ATGTTGCCGG TTCCAGGCGT
GCCTGCACAC GCCTTATGAA GACGGCTCCC GGCCGAATCT TTGCGAAGAC CGGCGCCGAA
GGCGTCTTCT GTGCGGCGAT ACCCGAAAAG GGCGTCGGCA TCGCGCTGAA ATGCGAGGAC
GGCACGACCC GTGCCGCCGA GGCGATGGTC GCGGCAACGC TCGCTCGGTT CTTTACGGAA
GATCGGGAGA TCCATGCGGC GCTGATGGCG CAGGCCAATC ACGCGATGCG CAACTGGAAC
GGAATGCACG TCGGGGACGT ACGGGTGGTG ACGGAGGCCT TTGCCGCCTG A
 
Protein sequence
MSNPVLVEVT RGNLVESRHR GMIVAVDAEG KTLFSLGEAD ARIFPRSACK AMQALPLIES 
GAADAYGFGD RELALACSSH SGESEHVALA ASMLAAAGRD VHALECGAHW SSDQKTLIAQ
ARSLEAPSAL HNNCSGKHAG FVCACCHSGT EVKDYIGYDH PLQKEIRGVM TELTGAVLGR
DDCGIDGCSI PAYALSMRGL ARGFAKMASG VGLGTERARA SKRLIDACMA EPFYVAGSRR
ACTRLMKTAP GRIFAKTGAE GVFCAAIPEK GVGIALKCED GTTRAAEAMV AATLARFFTE
DREIHAALMA QANHAMRNWN GMHVGDVRVV TEAFAA