Gene Smed_0569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0569 
Symbol 
ID5321405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp618299 
End bp619057 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content63% 
IMG OID640789505 
Producthypothetical protein 
Protein accessionYP_001326260 
Protein GI150395793 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.888289 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAAA AGTCACCGTC GATGAAATTC ATCCGCAAGC TCCTTCTCGC TTTCGCCGTC 
GTCTACCTGC TTCCGGCACT CGCGTCGGCG GGCCTGTGGT ACCTGAAGGA GCGGCCGCAG
AGTTGGCACG ACGCGGATTG GTCTTCATCA GGTATCTTAA CGGAAGCAGC TCACGGCCCG
GAGGCGGCGA TATATGTCTT CTCGGCGACC ACCGGAGGCA TGAAGGGGGC AGTGGCGAGC
CACGCCTGGA TCGTCACCAA GACTGAAGGG GCGCTCGCCT ATGACCGATA TGAAAAGGTC
GGCTGGGGCA GGCCGATCCG CAAGAACGCC TATCCGGCCG ACGGACGCTG GTACTCGAAC
GAGCCCCGCA TCGTTGTTGC TGTCAGGGGT GAAGAGGCCG AGCGCCTGAT CCCGAGGATC
GAAAAGGCGA TAGGGGCATA CCCTTACTCG TCCCCGGGCG CCTATCGTCT TTGGCCCGGC
CCCAACTCCA ACACCTTCAT TGCCCATGTC CTGCGGTCCG TGCCGGAGCT CGACGCGGTC
CTGCCCCCCG ATGCGGTCGG ACGCGATTAT CTGCCCGAGG GAAAACTGTT CCATGTCGAC
GCCGACGGGC TCGACCTGCA TGCCACGCTT TACGGGCTTG CCGGCATTTC CGCAGGCTGG
CGCAGCGGCC TGGAACTGCA TTTCATGGGA TTGGTGGCCG GCTTCGATAT CGCGCGACCC
GGAATCAAGA TACCGGCACT TGGCCGCTTC GGCATCTGA
 
Protein sequence
MAEKSPSMKF IRKLLLAFAV VYLLPALASA GLWYLKERPQ SWHDADWSSS GILTEAAHGP 
EAAIYVFSAT TGGMKGAVAS HAWIVTKTEG ALAYDRYEKV GWGRPIRKNA YPADGRWYSN
EPRIVVAVRG EEAERLIPRI EKAIGAYPYS SPGAYRLWPG PNSNTFIAHV LRSVPELDAV
LPPDAVGRDY LPEGKLFHVD ADGLDLHATL YGLAGISAGW RSGLELHFMG LVAGFDIARP
GIKIPALGRF GI