Gene Smed_0566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0566 
Symbol 
ID5321402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp614491 
End bp615039 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content63% 
IMG OID640789502 
Producthypothetical protein 
Protein accessionYP_001326257 
Protein GI150395790 
COG category[S] Function unknown 
COG ID[COG3247] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.484223 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCAGG CATTCGATCC CGCAGGCAGG GAGGCGGTGG CCCGCAAATG GGTATGGTTC 
GTCGCCCTTG GCGTCCTTCT GATCATGTGC GGCGGCATCG CCTTCGGAAA CCTGCTGATG
GCAACGGTCG CCTCGGTCTA TTACGTCGGC CTCATCATGC TCATTGGCGG CCTGCTCAAT
CTCGCCCATG CCTTTCAGGT CAAGAACTGG GGAAGCGTCC TCTACTGGAT CATGAGCGGC
GCCTTCTATG CGGGCGCGGG CCTCTTCGCC TTCATCAATC CGGTGCTCGC CTCATCGATA
TTGACCTTCC TTCTGGCCGT GGCGCTGATT GCCGCCGGTT GCTTCCGCAT GTGGGTCGGC
TTCAGGCTCC GGCCACTCGG GGGTTGGGGC TGGATGGTCA TCGGCGGCCT CGTCACGCTG
CTCGCCGGGC TGATCATCGC CGCCGGTTGG CCAGTCGACA GCCTCTGGAT TCTGGGCCTT
TTCCTGGCGG TCGATCTTGT CATGCAGGGG CTCGCCTCGA TCGCATTCGG CGTTCTCGCA
AGGGGCTGA
 
Protein sequence
MAQAFDPAGR EAVARKWVWF VALGVLLIMC GGIAFGNLLM ATVASVYYVG LIMLIGGLLN 
LAHAFQVKNW GSVLYWIMSG AFYAGAGLFA FINPVLASSI LTFLLAVALI AAGCFRMWVG
FRLRPLGGWG WMVIGGLVTL LAGLIIAAGW PVDSLWILGL FLAVDLVMQG LASIAFGVLA
RG