Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0565 |
Symbol | |
ID | 5321401 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 613739 |
End bp | 614347 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640789501 |
Product | transcriptional regulator BetI |
Protein accession | YP_001326256 |
Protein GI | 150395789 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | [TIGR03384] transcriptional repressor BetI |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.359685 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGAAGA TCGGAATGGA GCCGGTACGC CGAAAGGCGC TTGTGGACGC GGCGCTGCGC GTGATTGGCG ATCAGGGTAC GCTTGCCGTC ACCATGTCCG AGATCGCGCG GACCGCCGGG GTCTCGCCCG CCCTTGCGCA TCATTATTTC GGCAGCAAGG ACCAGTTGCT GATCGCCACC ATCCGCAGCC TTCTCGGCAA ATTGCGCGAC GATGCGATAA GCGCGATGAA GGCTGCGACG ACGCCGCGCG AGCAGGTGAG TGCACTGATC CGGGTGAGCT TCCGCGCCGA TCAATTCGCG CCGGAGACGG TCGCAGCCTG GCTCGCCTTC TATTCGGAAG CGCAACGTTC GGAGGAAGTG CGGCGCCTGC TCGTCATCTA TGCACGCCGG CTGCGCTCCA ACCTGCTAGC AGGCCTGAGA ACGCTCTGCG CCGCAGATGA CGCAGAGCGC ATTGCCGAGG GCACCGCTGC GATGATCGAC GGGCTCTACA TCCGGCAAAG TTTGAAATCG GCGCCGATCA GCATCGAAGC CTCGATCGCG CTCACGGAAG ACTATGTGAA TGCGCATTTG AAGGCGGGTG GTGGGGACTA CCCCTCTCCT CGGGTTTAA
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Protein sequence | MPKIGMEPVR RKALVDAALR VIGDQGTLAV TMSEIARTAG VSPALAHHYF GSKDQLLIAT IRSLLGKLRD DAISAMKAAT TPREQVSALI RVSFRADQFA PETVAAWLAF YSEAQRSEEV RRLLVIYARR LRSNLLAGLR TLCAADDAER IAEGTAAMID GLYIRQSLKS APISIEASIA LTEDYVNAHL KAGGGDYPSP RV
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