| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0547 |
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| Symbol | |
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| ID | 5321381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 589852 |
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| End bp | 593313 |
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| Gene Length | 3462 bp |
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| Protein Length | 1153 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640789481 |
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| Product | chromosome segregation protein SMC |
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| Protein accession | YP_001326238 |
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| Protein GI | 150395771 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1196] Chromosome segregation ATPases |
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| TIGRFAM ID | [TIGR02168] chromosome segregation protein SMC, common bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.725203 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTCA CCAAGCTGCG CCTGCTCGGC TTCAAGTCCT TCGTCGAACC GACGGAGTTC
ATCATCGAAC GTGGGCTTAC CGGAGTCGTC GGCCCGAACG GCTGCGGCAA GTCCAATCTC
GTCGAGGCGC TCCGCTGGGT AATGGGCGAG AACTCCTACA AGAACATGCG TGCCTCCGGC
ATGGATGACG TGATCTTTTC CGGATCCGGC AATCGTCCGG CGCGCAATAC GGCCGAGGTC
GGTCTCTATC TAGACAATAG CGACCGGACC GCCCCGGCAG CCTTTAACGA TAGCGACGAG
ATTCAGGTGA CGCGCCGCAT CGAGCGCGAG CAGGGTTCGG TCTACCGCAT CAACGGCAAG
GAGGCGCGCG CCAAGGATGT GCAGTTGCTG TTTGCCGACG CGTCCACCGG TGCCCGCTCG
CCCTCAATGG TGGGCCAGGG GCGCATCGGC GAGCTGATCG CCGCCAAGCC CCAGGCGCGC
CGTCAACTGC TCGAAGAGGC GGCCGGTATT TCCGGCCTGC ATTCGCGCCG TCACGAAGCG
GAGCTGCGCC TGAAGGCTGC CGAGACGAAT CTCGAGCGAC TCGATGACGT CACCTCGCAG
CTTGAAAGCC AGATCGAAAG CCTCAAGCGC CAGTCGCGCC AGGCCAACCG CTTCAAGATG
CTGTCGGCCG AAATCCGCCG GCACGAGGCC ATCCTGTTCC ATATCCGCTG GATTCAGGCC
AAGGAGGCGG AAGCCGAGGC GACCAGTCAG CTGAACCAGG TCACTGCACT TGTTGCCGAG
ACGGCGCAGT CGCAGATGGA AGCGGCCAAA GCGCAGGCAA TTACGAGCCT CAAGCTGCCG
GAACTGCGCC AGAATGAAGC GAAGCTCGCA GCGGCGCTGC AGCGCCTGCA AATTGCGCGT
GCGCAGCTTG AGGAGGATGC CGGCCGGATC CTGCGGCGCC GGGAGGAGCT GCAGCGGCGG
CTGGCGCAAC TGTCGGAGGA CATCGCCCGC GAGGAGCGGC TGGTCGCCGA CAATGCCGGC
ATTCTCGCCC GCCTCGATCA GGAGGAGGAG GAACTGCGAG ACGCGCTGGC CGAGGCGGAC
GATCGTAGCC TGGAGGCGCG GGAAAGGCTC GAGGAGGCCA ACGAAAAGCT TGCCGCAAGC
GAAGGCGCAC TTGCTCGCGT TACGGCCGAA CGGGCCGAGG CGCAGGCGGC GCGCAACCAG
ATCGAGAGAG CGCTGCGCGA TCTTTCCGAG CGCCAGGCGC GACTTGCGCG GCAGCTCGCG
GATCAGGCGC GCGAACTCGA CGATCTCGAC GGTCGGATGG CGAGCCTTCC CGACCCGGAC
GAGAAGAGAG AGCAAGTGGA GCATGCGGAG GCGTCGATGG AGGAGGCTGA GGCAGCGGTT
TCCGCCGTCG AGGAGAGCCT TGCCGAAGCC CGCGCCGCCG AAACCGCCAC ACGCCCGCCG
GTCGATCAGG CCCGGGCGCG GCTGAACGGC ATCGAGACGG AGGCACGAAC GATCCGCCGC
ATGCTCGAGG CGGCTGGCGC CAGCACCTTT CCGGCCGTCG TGGAGAGCCT GAAAGTCGAG
CGCGGCTTCG AGGCGGCGCT TGGTGCGGCG CTTGGCGACG ATCTGGACTC GTCCCTGGAA
CAGGCGGCGC CGGCACACTG GCGCATGCCG GGCGATGATG CGGACGACCC GGCATTGCCA
TCCGGTGTCC TGCCTTTGAT CGATTTCGTC CAGGGACCGG AGGCGCTGAG GCGAACGCTA
CGGCAGATCG GACTCGTCCA GAGTGAAGAT GAGGCGGAGC AACTGCTGCC CTTCCTGAGG
GCCGGGCAAC GGCTGGTGAC GAGGCAAGGC GCAGTCTGGC GTTGGGACGG CCATGTTGCC
GGCTCGGAGG CGCCCAGCGC CGCAGCCCTG AGGCTGGCCC AGAAGAACCG GCTCTTTGAG
CTCGAGGGTG AAGCGGAGGC GGCGAGCGGG GCTTTGTCGA AGGCAGAGGC GGACCTCGCG
GCTGCCGGTG CCCGCATTCG CGGCGAGGAC GAGCGCCTGA GGCTTTCGCG CGAGGCGCAG
CGCATGCGCG CCCGGCAGCT CGCCGAAGCG CGCGACGCAT TGGCCATCGC CGAGCGAGCC
TCCGGCGATC TTGCGCGCCG ACGCGCGGTT CTCGCCGAGA CCAAGCTTCA GATCGAGGGC
CAGGCGGAGG AGATCGCCGA GCAGATCGAG GTCGCCAACG AGGCCTTCGC AGATCAGCCG
GACCCAGCAG AGCTCGACCG TCATCTGAGC GATCGGACAG CCGAAGTCGC CACCGACCGT
GCGGCGGCGG CCGAGGCTCG CGCCGCCCAT GACGGTCTTG CGCGCGAAAA CAACGAGCGG
CACAGGCGGC TTATGGCCAT TGCCGGGGAG CGGGAGACCT GGGGCGCCAG GGCGGCGAGC
GCCGAGAATC ACATTGCGAC GCTTCGCGAA CGGGAGGCGG AAGCGCAAGA AGAGGTCGAA
GAACTGCTCG AAGCCCCTGA CGCGTTCGAC GAGAAGCGCC GCGCCCTGAT GAACGAGTTG
CAGAAGGCGG AAGCATCGCG TCGCGAGGCG GCCGACAACC TTGCCGAAGC GGAGAGCCGC
CAGCGCGAAT CGGACCGCCA GGCCGCCACT GCGCTTTCGG AGCTGGCCGA GGCACGTGAG
AAGCGCGGCC GTGCCGAAGA GAGGCTTGTT TCGGCGCGCG AGCGGCGGCT CGAGATAGAG
GCGCGCATTC TCGAAGCACT TTCCTGCGCC CCCCATGAAG TGATGCGGCT GACCGGCCTT
GCCGCCAACG AGGCCCTACC CGACATGCGC AGTGTGGAAC GGGAAGTCGA GCGGCTGAAG
ATCGAGCGGG AACGGCTTGG CGCAGTCAAC CTGCGCGCCG ACGAGGAGCA GAAGGAGCTT
TCGGAGCGGC TCGCGGCGCT GCTCAAGGAA CGTGACGACG TCATCGAGGC AATCCGCAGG
TTGAGAAGCG CCATTCAGAA CCTCAATCGC GAGGGACGCG AGCGGCTGAT CGCCGCTTTC
GATGTGGTCA ACGTGCAGTT CCAGCGGCTT TTCACGCATC TCTTCGGCGG CGGCACCGCG
GAACTGCAAC TCATCGAAAG CGACGATCCT CTGGAAGCCG GGCTCGAAAT TCTTGCCCGT
CCGCCTGGCA AGAAGCCTCA GACGATGACG CTGCTTTCGG GCGGCGAACA GGCGCTGACC
GCCATGGCGC TGATTTTTGC GGTGTTTCTC ACCAATCCGG CGCCGATCTG CGTGCTCGAT
GAGGTGGACG CGCCGCTCGA CGACCACAAT GTCGAGCGCT ATTGCAACCT GATGGACGAA
ATGGCTCTCT CGACTGAGAC CCGTTTCGTC ATCATCACCC ACAATCCGAT TACAATGGCC
CGGATGAACC GCCTGTTCGG AGTCACAATG GCGGAGCAGG GCGTTTCGCA GCTCGTCTCG
GTCGATCTGC AGACGGCGGA GCGCATGCGT GAAGCCGTTT GA
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| Protein sequence | MKFTKLRLLG FKSFVEPTEF IIERGLTGVV GPNGCGKSNL VEALRWVMGE NSYKNMRASG
MDDVIFSGSG NRPARNTAEV GLYLDNSDRT APAAFNDSDE IQVTRRIERE QGSVYRINGK
EARAKDVQLL FADASTGARS PSMVGQGRIG ELIAAKPQAR RQLLEEAAGI SGLHSRRHEA
ELRLKAAETN LERLDDVTSQ LESQIESLKR QSRQANRFKM LSAEIRRHEA ILFHIRWIQA
KEAEAEATSQ LNQVTALVAE TAQSQMEAAK AQAITSLKLP ELRQNEAKLA AALQRLQIAR
AQLEEDAGRI LRRREELQRR LAQLSEDIAR EERLVADNAG ILARLDQEEE ELRDALAEAD
DRSLEARERL EEANEKLAAS EGALARVTAE RAEAQAARNQ IERALRDLSE RQARLARQLA
DQARELDDLD GRMASLPDPD EKREQVEHAE ASMEEAEAAV SAVEESLAEA RAAETATRPP
VDQARARLNG IETEARTIRR MLEAAGASTF PAVVESLKVE RGFEAALGAA LGDDLDSSLE
QAAPAHWRMP GDDADDPALP SGVLPLIDFV QGPEALRRTL RQIGLVQSED EAEQLLPFLR
AGQRLVTRQG AVWRWDGHVA GSEAPSAAAL RLAQKNRLFE LEGEAEAASG ALSKAEADLA
AAGARIRGED ERLRLSREAQ RMRARQLAEA RDALAIAERA SGDLARRRAV LAETKLQIEG
QAEEIAEQIE VANEAFADQP DPAELDRHLS DRTAEVATDR AAAAEARAAH DGLARENNER
HRRLMAIAGE RETWGARAAS AENHIATLRE REAEAQEEVE ELLEAPDAFD EKRRALMNEL
QKAEASRREA ADNLAEAESR QRESDRQAAT ALSELAEARE KRGRAEERLV SARERRLEIE
ARILEALSCA PHEVMRLTGL AANEALPDMR SVEREVERLK IERERLGAVN LRADEEQKEL
SERLAALLKE RDDVIEAIRR LRSAIQNLNR EGRERLIAAF DVVNVQFQRL FTHLFGGGTA
ELQLIESDDP LEAGLEILAR PPGKKPQTMT LLSGGEQALT AMALIFAVFL TNPAPICVLD
EVDAPLDDHN VERYCNLMDE MALSTETRFV IITHNPITMA RMNRLFGVTM AEQGVSQLVS
VDLQTAERMR EAV
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