Gene Smed_0545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0545 
Symbol 
ID5321379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp588323 
End bp589132 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content61% 
IMG OID640789479 
ProductDSBA oxidoreductase 
Protein accessionYP_001326236 
Protein GI150395769 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1651] Protein-disulfide isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.134926 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.557973 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCTT CCCAAATAAG CCTTCCGAAA CGCCTGCTGA GCGGCGTCGC CGTTGCAATG 
CTCGCTCTGG CGCTTGCGGC CTGCAGCGAT GAAAAGCAGG AGGCTGCCTC GACGGCCCCC
ACGGAGACGA CGGCTACCCC GGATACGACG ACCACCGCCT CGACGGCTGC GAAACCAGCC
GCCTTGAGCG AGGCGAAGCC AGCGGCGGAA GTGGCGCAGG CATCGACCCC TGCCGCAAAG
GTGGAATTGC CGACGCCGGA GGGAACGGTC GACGCGGCGA AGCTTCTCGA GCCCGGCGCG
CTGCCGGAGA TGGCGTTGGG AGAGGCCAGC GCGCCGGTCA CGATCGTCGA ATATATGTCG
ATGACCTGCC CGCATTGCGC CAATTTCCAC AACGACACCT TCGATGCGAT CAAGACGAAA
TATGTCGACA GCGGCAAGGT GCGCTTCATC GTCCGCGAAT TCCCGTTCGA CCCGCGCGCC
GCCGCCGCCT TCATGCTGGC CCGTTGCGCA CCGGAAGGGC AATATTTCCC GATGATTTCC
ATGCTGTTCA AACAGCAGGA ACAGTGGGCG GCCGCGCAGA ACGGCCGCGA TGCACTGCTG
CAATTGTCGA AACTTGCCGG TTTTACACAG GAGAGCTTCG AGGCCTGCTT GACGAACCAA
AAACTTCTGG ATGATGTGAA TGCCGTGATG CAGAGGGGCG CCAAGGAATT CGGCGTCAAG
TCGACACCGA CCTTCTTCGT CAATGGTGAG CACTATTCGG GGGACATGTC GGTTGACGTT
ATGTCGGCCC TCATCGACAG CAAGCTCTGA
 
Protein sequence
MSASQISLPK RLLSGVAVAM LALALAACSD EKQEAASTAP TETTATPDTT TTASTAAKPA 
ALSEAKPAAE VAQASTPAAK VELPTPEGTV DAAKLLEPGA LPEMALGEAS APVTIVEYMS
MTCPHCANFH NDTFDAIKTK YVDSGKVRFI VREFPFDPRA AAAFMLARCA PEGQYFPMIS
MLFKQQEQWA AAQNGRDALL QLSKLAGFTQ ESFEACLTNQ KLLDDVNAVM QRGAKEFGVK
STPTFFVNGE HYSGDMSVDV MSALIDSKL