| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0538 |
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| Symbol | |
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| ID | 5321372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 581506 |
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| End bp | 582612 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640789472 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_001326229 |
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| Protein GI | 150395762 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0513259 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.872247 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCTAT CATTATTGAG GGGAATGACC TTGGCCGCCG GCGTCGCTTT CGCGCCGCTC
GCCCACGCCG ACATCACCAT CGGCGTCATC ACGCCGCTCA CCGGTCCCGT TGCGGCCTTT
GGCGAGCAGG TCAAGAACGG CGCCGAGGCG GCAGTCGAAG CGATCAACAG CGCCGGCGGC
GTCAATGGGG AGAAGCTCGT CCTCAAGATC GTCGACGACG CGGGTGAACC CAAGCAGGCC
GTTTCCGTCG CCAACCAGCT GGCGGGCGAA GGCGTACGAT ACGTCGTCGG TCCGGTGCTC
TCCGGTACGT CGATGCCGGC ATCCGACGTA CTGGCGGAAA ACGGAATCCT CATGGTCACG
CCGACGGCGA CCACGCCCGA CCTTACCACC CGTGGTCTGT GGAACGTGCT GCGCACTTGC
GGACGCGACG ATCAGCAGGC GGTCGTCGCC GCCGATTACG TCGTCAAGAA CTTCAAGGAC
AAGCGCGTCG CGGTGCTGCA CGACAAGGGC GCCTATGGCA AGGGCCTTGC CGACGGCTTC
AAAGCTGCGA TCAACGCAGG CGGCATTACC GAGGCGGTCT ATGAAGGCCT GACGCCGGGC
GAGAAGGATT TCGGGGCGAT CGTCACCCGC CTGAAGGCCG AGAAAGTCGA CGTCGTCTAT
TTCGGCGGCT ACCATGCAGA AGGCGGGCTG CTCGCTCGTC AGATGCATGA CCAGGGTGTC
AAGGCACAAC TCCTCGGCGG TGACGGCCTG TCCAACACCG AGTACTGGGC AATCGGCGGC
GAAGCCGCAA CCGGCACCAT CTACACCAAT GCAAGCGATG CCACGCGCAA CCCGGCCGCC
GCACCGGTAA TCGAGGCTCT CAAGGCCAAG AACATTCCGG CGGAAGCTTT CACGCTCAAC
GCCTATGCCG CCGTTCAGGT CCTCAAGGCA GGCATCGAGA AGGCCGGTTC GACCGAAGAT
GCGACCGCGG TGGCCACCGC CATAAAGTCC GGCGAGGCCA TCGACACCGT CATCGGAAAG
CTGACCTATG GCGAAAGCGG CGATCTCACC TCGCCGAGCT TCTCGCTCTA CAAGTGGGAA
GGCGGACAGA GCGTCGCGGT CGAATAA
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| Protein sequence | MRLSLLRGMT LAAGVAFAPL AHADITIGVI TPLTGPVAAF GEQVKNGAEA AVEAINSAGG
VNGEKLVLKI VDDAGEPKQA VSVANQLAGE GVRYVVGPVL SGTSMPASDV LAENGILMVT
PTATTPDLTT RGLWNVLRTC GRDDQQAVVA ADYVVKNFKD KRVAVLHDKG AYGKGLADGF
KAAINAGGIT EAVYEGLTPG EKDFGAIVTR LKAEKVDVVY FGGYHAEGGL LARQMHDQGV
KAQLLGGDGL SNTEYWAIGG EAATGTIYTN ASDATRNPAA APVIEALKAK NIPAEAFTLN
AYAAVQVLKA GIEKAGSTED ATAVATAIKS GEAIDTVIGK LTYGESGDLT SPSFSLYKWE
GGQSVAVE
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