Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0532 |
Symbol | |
ID | 5321366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 573231 |
End bp | 573836 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640789466 |
Product | hypothetical protein |
Protein accession | YP_001326223 |
Protein GI | 150395756 |
COG category | [K] Transcription |
COG ID | [COG1678] Putative transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGACAA ACGTGCTGAA TTCGATACGC GAACGTGGCT TCCTTGACGG TCAATTCCTG ATCGCCATGC CCGGCATGTT CGACGCCAAT TTCGCCCGGA CGGTCATCTT CGTCTGCGCC CATTCGGAAG ACGGGGCGAT GGGATTTATC CTGAACCGCC CGCAGCGCCT GACCTTCCCG GATGTGCTGC TGCACCTGCA GCTCCTCGAT CCGGATGAGG TGATACGGCT GCCGTCGACC ACGCGCGAGT TCCAGATCCA GGCCGGAGGC CCCGTCGAGA CCGGACGCGG CTTCGTACTG CATTCGGATG ATTATCTCAG CGACTCCAGC ATTCCCGTCA GTGACGACAT CTGCCTTACG GCGACGCTCG ATATCGTCAG GGCAATTTCG CGCGGCGAGG GTCCTGTCAA AGCCACCATG CTGCTCGGCT ATGCCGGATG GGGGCCGGGT CAACTGGAAG CCGAGATCAC GCAGAATGGT TGGCTGACTT GCCCTGCGCA AGAGGAGCTG ATCTTCAGCC GAAACCTCGA CGAGAAGTAC GACAGGGCCT TGGCCCTGAT GGGCGTCAGC CCGGCCATGC TCTCGACCGA CTCGGGCCAC GCCTGA
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Protein sequence | MATNVLNSIR ERGFLDGQFL IAMPGMFDAN FARTVIFVCA HSEDGAMGFI LNRPQRLTFP DVLLHLQLLD PDEVIRLPST TREFQIQAGG PVETGRGFVL HSDDYLSDSS IPVSDDICLT ATLDIVRAIS RGEGPVKATM LLGYAGWGPG QLEAEITQNG WLTCPAQEEL IFSRNLDEKY DRALALMGVS PAMLSTDSGH A
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