Gene Smed_0532 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0532 
Symbol 
ID5321366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp573231 
End bp573836 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content62% 
IMG OID640789466 
Producthypothetical protein 
Protein accessionYP_001326223 
Protein GI150395756 
COG category[K] Transcription 
COG ID[COG1678] Putative transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACAA ACGTGCTGAA TTCGATACGC GAACGTGGCT TCCTTGACGG TCAATTCCTG 
ATCGCCATGC CCGGCATGTT CGACGCCAAT TTCGCCCGGA CGGTCATCTT CGTCTGCGCC
CATTCGGAAG ACGGGGCGAT GGGATTTATC CTGAACCGCC CGCAGCGCCT GACCTTCCCG
GATGTGCTGC TGCACCTGCA GCTCCTCGAT CCGGATGAGG TGATACGGCT GCCGTCGACC
ACGCGCGAGT TCCAGATCCA GGCCGGAGGC CCCGTCGAGA CCGGACGCGG CTTCGTACTG
CATTCGGATG ATTATCTCAG CGACTCCAGC ATTCCCGTCA GTGACGACAT CTGCCTTACG
GCGACGCTCG ATATCGTCAG GGCAATTTCG CGCGGCGAGG GTCCTGTCAA AGCCACCATG
CTGCTCGGCT ATGCCGGATG GGGGCCGGGT CAACTGGAAG CCGAGATCAC GCAGAATGGT
TGGCTGACTT GCCCTGCGCA AGAGGAGCTG ATCTTCAGCC GAAACCTCGA CGAGAAGTAC
GACAGGGCCT TGGCCCTGAT GGGCGTCAGC CCGGCCATGC TCTCGACCGA CTCGGGCCAC
GCCTGA
 
Protein sequence
MATNVLNSIR ERGFLDGQFL IAMPGMFDAN FARTVIFVCA HSEDGAMGFI LNRPQRLTFP 
DVLLHLQLLD PDEVIRLPST TREFQIQAGG PVETGRGFVL HSDDYLSDSS IPVSDDICLT
ATLDIVRAIS RGEGPVKATM LLGYAGWGPG QLEAEITQNG WLTCPAQEEL IFSRNLDEKY
DRALALMGVS PAMLSTDSGH A