Gene Smed_0530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0530 
Symbol 
ID5321364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp571618 
End bp572103 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content61% 
IMG OID640789464 
Productredoxin domain-containing protein 
Protein accessionYP_001326221 
Protein GI150395754 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0678] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACATTG CCGTCGGAGA CAAGCTGCCC AACGTCACAT TCAAGGAAAA GACCGCGGAG 
GGCCCGGTCG AAGTAACCAC CGAACAGCTG TTCAAGGGCA AGCGCGTTGT TCTTTTCGCG
GTGCCCGGCG CCTTTACCCC CACCTGCTCA CTCAATCATC TTCCCGGCTA TCTGGAAAAT
CGGGACGCCA TTCTGGCGCG CGGGGTCGAC GACATCGCAG TCGTGGCGGT CAACGACCTG
CATGTGATGG GCGCCTGGGC CACTCATTCC GGCGGCATGG GCAAGATACA CTTCCTTTCC
GACTGGAACG CCGCCTTTAC CAGGGCGATC GGGATGGAAA TCGATCTCTC TGCCGGCACA
CTCGGCATTC GCTCCAAGCG ATACTCGATG CTGGTCGAGG ACGGTGTCGT CAAGGCGTTG
AACGTCGAGG AAAGCCCGGG ACAGGCGACG GCTTCCGGCG CGGCAGCGAT GCTGGAACAG
CTTTGA
 
Protein sequence
MNIAVGDKLP NVTFKEKTAE GPVEVTTEQL FKGKRVVLFA VPGAFTPTCS LNHLPGYLEN 
RDAILARGVD DIAVVAVNDL HVMGAWATHS GGMGKIHFLS DWNAAFTRAI GMEIDLSAGT
LGIRSKRYSM LVEDGVVKAL NVEESPGQAT ASGAAAMLEQ L