Gene Smed_0525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0525 
Symbol 
ID5321359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp567734 
End bp568117 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content60% 
IMG OID640789459 
Producthypothetical protein 
Protein accessionYP_001326216 
Protein GI150395749 
COG category[S] Function unknown 
COG ID[COG5349] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.150088 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGAAG ACAGGGCGCT CTACCCACCC GTTGATCCGG TCATGACGGG CGTCAAGGGA 
CTCTGCCCGC GCTGCGGCCA GGGGAAGCTC TTCGACGGCT TGCTGAAGGT TCGTCCGGCC
TGCAGCAATT GCGAACTCGA TTATGGTTTC GCCGATTCCG GCGATGGTCC GGTCGTGTTC
GTTATCCTGA TCGTGGGCTT CATCGTCGTC GGCGCAGCGC TCTGGATGGA GGTCAATGTC
AACCCGCCGC TCTGGCTGCA CTTCCTCCTG TGGATCCCGC TTGCGACGGT TTTAAGCCTG
GCCCTGACGC GTATGCTGAA GGGCGTTCTC ATCAATCTGC AATACCGCAA CAATGCGCGC
CCCGGTGAAA TCGACCGTGG CTGA
 
Protein sequence
MNEDRALYPP VDPVMTGVKG LCPRCGQGKL FDGLLKVRPA CSNCELDYGF ADSGDGPVVF 
VILIVGFIVV GAALWMEVNV NPPLWLHFLL WIPLATVLSL ALTRMLKGVL INLQYRNNAR
PGEIDRG