Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0524 |
Symbol | |
ID | 5321358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 567175 |
End bp | 567717 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640789458 |
Product | hypothetical protein |
Protein accession | YP_001326215 |
Protein GI | 150395748 |
COG category | [S] Function unknown |
COG ID | [COG3034] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.31158 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGCCGC CCCGTTTTCT TTGGGGCTGC TGGTTCTGGA TGAGGATAGT GAAAATCGCC TGGATGATGA CGCTGTTTGC GGCGACTGTC GCCTTTCCAT TATCGGCCTT GGCCGCCGAA ACCGCAGACA AGGTTATCGT CTTCAAGGAG CGGCGCGTGC TGCAATTGTT CCAGGGTGAG AAGCTGCTGC GGGAATACCC GGTCGTGCTC GGCGGCAATC CGGTCGGACC CAAGAGGAGG GAGGGCGATC AGAAGACGCC GGAGGGCTCC TACGTCCTCG ATTGGCGCAA TCCTGGCAGC AGCTTCTATA AATCCATTCA CATTTCCTAT CCCGCACCGA AGGACCTGGA GGAAGCGGCC GCCAGGTATG TCGAACCCGG CGGAATGATC ATGATCCATG GCCAGCCCAA TTATCTCGGC TGGCTGGCGT TTTTGACGCA GATGTTCGAT TGGACGAATG GCTGCATTGC CGTTACCAAT GCGGAAATGG ACGAAATCTG GGACATGGTT CCCAACAATA CCCCGATCGT GATCAATCCA TGA
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Protein sequence | MRPPRFLWGC WFWMRIVKIA WMMTLFAATV AFPLSALAAE TADKVIVFKE RRVLQLFQGE KLLREYPVVL GGNPVGPKRR EGDQKTPEGS YVLDWRNPGS SFYKSIHISY PAPKDLEEAA ARYVEPGGMI MIHGQPNYLG WLAFLTQMFD WTNGCIAVTN AEMDEIWDMV PNNTPIVINP
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