Gene Smed_0524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0524 
Symbol 
ID5321358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp567175 
End bp567717 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content57% 
IMG OID640789458 
Producthypothetical protein 
Protein accessionYP_001326215 
Protein GI150395748 
COG category[S] Function unknown 
COG ID[COG3034] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.31158 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCCGC CCCGTTTTCT TTGGGGCTGC TGGTTCTGGA TGAGGATAGT GAAAATCGCC 
TGGATGATGA CGCTGTTTGC GGCGACTGTC GCCTTTCCAT TATCGGCCTT GGCCGCCGAA
ACCGCAGACA AGGTTATCGT CTTCAAGGAG CGGCGCGTGC TGCAATTGTT CCAGGGTGAG
AAGCTGCTGC GGGAATACCC GGTCGTGCTC GGCGGCAATC CGGTCGGACC CAAGAGGAGG
GAGGGCGATC AGAAGACGCC GGAGGGCTCC TACGTCCTCG ATTGGCGCAA TCCTGGCAGC
AGCTTCTATA AATCCATTCA CATTTCCTAT CCCGCACCGA AGGACCTGGA GGAAGCGGCC
GCCAGGTATG TCGAACCCGG CGGAATGATC ATGATCCATG GCCAGCCCAA TTATCTCGGC
TGGCTGGCGT TTTTGACGCA GATGTTCGAT TGGACGAATG GCTGCATTGC CGTTACCAAT
GCGGAAATGG ACGAAATCTG GGACATGGTT CCCAACAATA CCCCGATCGT GATCAATCCA
TGA
 
Protein sequence
MRPPRFLWGC WFWMRIVKIA WMMTLFAATV AFPLSALAAE TADKVIVFKE RRVLQLFQGE 
KLLREYPVVL GGNPVGPKRR EGDQKTPEGS YVLDWRNPGS SFYKSIHISY PAPKDLEEAA
ARYVEPGGMI MIHGQPNYLG WLAFLTQMFD WTNGCIAVTN AEMDEIWDMV PNNTPIVINP