Gene Smed_0523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0523 
Symbol 
ID5321357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp566258 
End bp567136 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content62% 
IMG OID640789457 
Productcytochrome c oxidase subunit III 
Protein accessionYP_001326214 
Protein GI150395747 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.523755 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGAG CGCACCAGAA GCAACACGAC TATCACATTA TCGACCCGAG CCCATGGCCG 
CTGCTCGCGT CCATCGGCGC CTTCGTCATG GCTCTCGGCG GCGTCGGCTA CATGCGCTAT
CTCTCCGGCG GCTCCTTCAA GATGTTCGGG CTGGAGCTCG CCAATCCCTG GGTCTTCTTC
ATTGGCCTGG CACTGATCCT TTATACCATG TTCGGCTGGT GGTCGGACAC GATCAAGGAA
GCGCATGAGG GCCATCATAC CCGGGTCGTG TCGCTGCACC TGCGCTACGG CATGATCATG
TTCATCGCTT CGGAGGTGAT GTTCTTCGCC GCCTGGTTCT GGGCCTTCTT CGACGCGAGC
CTGTTTCCGG GCGAAGCGAT CCAGGCCGCG CGCGCCGAGT TCACCGGCGG CGTCTGGCCG
CCGAAGGGCA TCGAGGTTCT CGATCCTTGG CACCTGCCGC TCTACAACAC CGTCATCCTG
CTGCTCTCCG GCACCACGGT GACCTGGGCG CACCACGCGC TGCTGCACAA CGACCGCAAG
GGCCTGGTCT ATGGTTTGAC GCTTACTGTC GTCCTCGGGG TTCTCTTCTC CTATGTGCAG
GGCTACGAAT ATGCCCACGC GCCCTTCGCC TTCAAGGATT CGATCTACGG CGCTACCTTC
TTCATGGCGA CCGGCTTCCA CGGTTTCCAC GTACTGGTCG GCACGATCTT CCTGCTCGTC
TGCCTGCTGC GCGCGCTGCG TGGCGACTTC ACGCCGAAGC ATCACTTCGG CTTCGAGGCT
GCGGCCTGGT ACTGGCATTT CGTCGACGTC GTCTGGCTCT TCCTGTTCTT CTCCATCTAC
ATCTGGGGTG GCTGGGGTGC GCCGATTGCG CATGGCTGA
 
Protein sequence
MAGAHQKQHD YHIIDPSPWP LLASIGAFVM ALGGVGYMRY LSGGSFKMFG LELANPWVFF 
IGLALILYTM FGWWSDTIKE AHEGHHTRVV SLHLRYGMIM FIASEVMFFA AWFWAFFDAS
LFPGEAIQAA RAEFTGGVWP PKGIEVLDPW HLPLYNTVIL LLSGTTVTWA HHALLHNDRK
GLVYGLTLTV VLGVLFSYVQ GYEYAHAPFA FKDSIYGATF FMATGFHGFH VLVGTIFLLV
CLLRALRGDF TPKHHFGFEA AAWYWHFVDV VWLFLFFSIY IWGGWGAPIA HG