Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0523 |
Symbol | |
ID | 5321357 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 566258 |
End bp | 567136 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640789457 |
Product | cytochrome c oxidase subunit III |
Protein accession | YP_001326214 |
Protein GI | 150395747 |
COG category | [C] Energy production and conversion |
COG ID | [COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.523755 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGGAG CGCACCAGAA GCAACACGAC TATCACATTA TCGACCCGAG CCCATGGCCG CTGCTCGCGT CCATCGGCGC CTTCGTCATG GCTCTCGGCG GCGTCGGCTA CATGCGCTAT CTCTCCGGCG GCTCCTTCAA GATGTTCGGG CTGGAGCTCG CCAATCCCTG GGTCTTCTTC ATTGGCCTGG CACTGATCCT TTATACCATG TTCGGCTGGT GGTCGGACAC GATCAAGGAA GCGCATGAGG GCCATCATAC CCGGGTCGTG TCGCTGCACC TGCGCTACGG CATGATCATG TTCATCGCTT CGGAGGTGAT GTTCTTCGCC GCCTGGTTCT GGGCCTTCTT CGACGCGAGC CTGTTTCCGG GCGAAGCGAT CCAGGCCGCG CGCGCCGAGT TCACCGGCGG CGTCTGGCCG CCGAAGGGCA TCGAGGTTCT CGATCCTTGG CACCTGCCGC TCTACAACAC CGTCATCCTG CTGCTCTCCG GCACCACGGT GACCTGGGCG CACCACGCGC TGCTGCACAA CGACCGCAAG GGCCTGGTCT ATGGTTTGAC GCTTACTGTC GTCCTCGGGG TTCTCTTCTC CTATGTGCAG GGCTACGAAT ATGCCCACGC GCCCTTCGCC TTCAAGGATT CGATCTACGG CGCTACCTTC TTCATGGCGA CCGGCTTCCA CGGTTTCCAC GTACTGGTCG GCACGATCTT CCTGCTCGTC TGCCTGCTGC GCGCGCTGCG TGGCGACTTC ACGCCGAAGC ATCACTTCGG CTTCGAGGCT GCGGCCTGGT ACTGGCATTT CGTCGACGTC GTCTGGCTCT TCCTGTTCTT CTCCATCTAC ATCTGGGGTG GCTGGGGTGC GCCGATTGCG CATGGCTGA
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Protein sequence | MAGAHQKQHD YHIIDPSPWP LLASIGAFVM ALGGVGYMRY LSGGSFKMFG LELANPWVFF IGLALILYTM FGWWSDTIKE AHEGHHTRVV SLHLRYGMIM FIASEVMFFA AWFWAFFDAS LFPGEAIQAA RAEFTGGVWP PKGIEVLDPW HLPLYNTVIL LLSGTTVTWA HHALLHNDRK GLVYGLTLTV VLGVLFSYVQ GYEYAHAPFA FKDSIYGATF FMATGFHGFH VLVGTIFLLV CLLRALRGDF TPKHHFGFEA AAWYWHFVDV VWLFLFFSIY IWGGWGAPIA HG
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