Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0518 |
Symbol | |
ID | 5321352 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 561807 |
End bp | 562691 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640789452 |
Product | cytochrome c oxidase subunit II |
Protein accession | YP_001326209 |
Protein GI | 150395742 |
COG category | [C] Energy production and conversion |
COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 |
TIGRFAM ID | [TIGR02866] cytochrome c oxidase, subunit II |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAAAACA AGGCCTATGC AGTTCTGGCA GCGCTTGCCT GTCTGCTTTT TGCTTCGAGC GCCTTTGCTG ACAAGCCTGT CGACTGGCAG ACGAATTTTC AGCCGGCTGC TACTGGCATA ATGGAAGAAA TCACGTGGTT TGAGCATTAT ACCCTGTGGT TCATCATTCC GATCACACTT TTCGTTCTTC TTCTGCTGGT CGTCGTGGTC GTCAAGTTTC GCGAGAGTGC CAATCCGGTT CCGTCGAGGA CCAGCCACAA TACGCTGATC GAAGTCGTCT GGACCGTGGG TCCGGTCATC GTGCTTCTTT TCCTGGCGGT TCCTTCCTTC CAGCTCCTGA CCGCGCAACT CACGCCTCCG GAAAATCCGG ACCTGACGGT CAAGGCGACC GGCAACCAAT GGTACTGGTC CTATGAATAC GAAGTCGGCG AAAACCCGCT GTCCTTCGAC AGCCTGCTTC TGAAGGACGA GGACAGGGCC GGGCTCGGCA AGGAGGACAA GGGGCAATAT CCGCGTCTTC TCGCGGTCGA CAACGAGGTG GTCGTGCCGG TCGGCAAGAC GGTTCGCCTG CTCGTCACCG CGGCTGACGT GATCCATGCC TTCGCCATGC CTGCTTTCGG TGTCAAGATC GACGCGGTTC CAGGCCGCCT CAACGAGACC TGGTTCAAGG CCGATCGCGA AGGCCTCTAT TACGGCCAGT GTTCCGAGCT CTGCGGCAAG GATCACGCCT ATATGCCGAT CGCCGTCCGC GTTGTTGCGC AGGATAAATA CGACGCCTGG CTCGCCGCCG CCGCAACCAA TATCGGCGAA GCGAACAAGG CGCTCATGGC GTCCGTCGAC GGCGCGGCCA AGGCCGTTGA CGTCGCCGAA AACGCCGCAC AGTAA
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Protein sequence | MKNKAYAVLA ALACLLFASS AFADKPVDWQ TNFQPAATGI MEEITWFEHY TLWFIIPITL FVLLLLVVVV VKFRESANPV PSRTSHNTLI EVVWTVGPVI VLLFLAVPSF QLLTAQLTPP ENPDLTVKAT GNQWYWSYEY EVGENPLSFD SLLLKDEDRA GLGKEDKGQY PRLLAVDNEV VVPVGKTVRL LVTAADVIHA FAMPAFGVKI DAVPGRLNET WFKADREGLY YGQCSELCGK DHAYMPIAVR VVAQDKYDAW LAAAATNIGE ANKALMASVD GAAKAVDVAE NAAQ
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