| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0517 |
|---|
| Symbol | |
|---|
| ID | 5321351 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | - |
|---|
| Start bp | 560845 |
|---|
| End bp | 561375 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640789451 |
|---|
| Product | invasion associated locus B family protein |
|---|
| Protein accession | YP_001326208 |
|---|
| Protein GI | 150395741 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5342] Invasion protein B, involved in pathogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCCTGT CCCTCTTCTC CCGGCTGCCC GGTCTGACCG CGCTCGCGTT TGCCGCCTTC
GCCTTCCCCG CAGTCAGCTT GGCCCAGCAA TCCAATGCGA CGCCGGGAAC GGTGAAATCA
AATCACGGTG CGTGGTCGAT CGTCTGCGAT CAGCCAGCCG GCGCCTCGGC CGAACAGTGC
GCGCTGATGC AGAACGTCAT TGCCGAAGAC AGGCCGGAAG TCGGCCTCTC GGTCGTCGTA
TTGAAGACGG CGGACCGCAA GGCGAAGATC CTTCGCGTCC TCGCGCCGCT CGGCGTGCTC
CTCCCGAACG GCCTCGGTCT AAACGTCGAC GGCAAGGACA TCGGGCGCGC CTATTTCGTG
CGCTGCTTCT CCGACGGCTG CTACGCCGAG GTGGTACTCG AGGACGAACT GCTGAAAACT
TTCCGCGCCG GCGCGACGGC CACCTTCATC GTCTTCCAGT CTCCGGAGGA AGGCATTGGC
ATACCCGTCG ACCTCAAGGG CTTCGACGAG GGCTACGACG CGCTTCCCTG A
|
|---|
| Protein sequence | MGLSLFSRLP GLTALAFAAF AFPAVSLAQQ SNATPGTVKS NHGAWSIVCD QPAGASAEQC
ALMQNVIAED RPEVGLSVVV LKTADRKAKI LRVLAPLGVL LPNGLGLNVD GKDIGRAYFV
RCFSDGCYAE VVLEDELLKT FRAGATATFI VFQSPEEGIG IPVDLKGFDE GYDALP
|
|---|
| |