Gene Smed_0513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0513 
Symbol 
ID5321347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp557206 
End bp557790 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content62% 
IMG OID640789447 
Productphosphoglycerate mutase 
Protein accessionYP_001326204 
Protein GI150395737 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCATAT ACATGGTTCG CCATGGACAA ACGGACTGGA ACGCGGAGAG CCGCCTTCAG 
GGTCAGAAAG ACATCCCCCT CAACAAGACG GGGCGGCGGC AGGCGACCGG GAACGGCGTC
GCTTTGAGCA AAATCCTCGG GAACGGCGCC GCCGACTTCG ATTTCGTCAG CAGCCCGCTT
GGACGTACGC GCGAAACAAT GGAGCGCCTC CGGCAGGCGA TGGGCCTCGA TCCCTCGACC
TACCGCACCG ACGAGCGGCT GAAGGAAGTC TCCTTCGGCG ACTGGGAAGG CTATACGCTT
CCCGAACTGA AACAGCTCGT TCCCGGGCGC ATCGCGGAAA GGCGCATTGC GAAATGGGAT
TTCATCCCAC CCGGTACCGA TGCGGAAAGC TACGAGATCC TGTCCTGGCG TGTCGGCGCC
TGGCTCAAAA GCGTGACGCG ACCCACCGTC TGCGTCAGCC ATGGCGGCGT TATCAGGGCA
CTGTTCAAGC TGCTTGGGGA GATGAATGCC GATGAAGCGG CAGCTGCGGC GATACCGCAG
GACCGCCTGC TGAAAATCGC CGGCGGGTCT ATCGGGTGGC TTTAA
 
Protein sequence
MLIYMVRHGQ TDWNAESRLQ GQKDIPLNKT GRRQATGNGV ALSKILGNGA ADFDFVSSPL 
GRTRETMERL RQAMGLDPST YRTDERLKEV SFGDWEGYTL PELKQLVPGR IAERRIAKWD
FIPPGTDAES YEILSWRVGA WLKSVTRPTV CVSHGGVIRA LFKLLGEMNA DEAAAAAIPQ
DRLLKIAGGS IGWL