| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0507 |
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| Symbol | |
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| ID | 5321341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 550909 |
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| End bp | 551967 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640789441 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_001326198 |
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| Protein GI | 150395731 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.142501 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGACG GCTTCGCGGG CCTCGTCCGC ACCCATGTCA AACGCACTGC GATCAGCGGT
GGTCTTGAGG CTGCGCATCT GCTTGCGCGT GCGCGTCTGA TGGGGGCGGC CCGTGGTCGC
GGGGCAGTCT TTACACTGCA CCACGTCCGC CCGAAGGTTC CGCGGAGCTT CGATCCCAAT
GCCCATCTGG AAATCACACC GGAATTCCTC GAGGATGCGA TCCTGACATT GAAGCGGGAC
GGCTATCGCT TCATCCCTTT GGACGAGCTG CCTTCCAGCC TGACTTTCGC CGGCACCCGA
CCCCTTGCCT GTTTCACCCT CGACGACGGT TACCGCAATA ATCTCGACCA CGCGCTGCCC
GTCTTCGAGC GGCACGGCGT GCCTTTCACC GTCTTCGTCA CGGCCGGCTA CGCCGAGCGC
ACCCACACGC TCTGGTGGGA GACACTCGCC GAGCTCCTGT CCGTCAGCCG AAGGTTCCAC
TTCGATTTCG GCACGGGCGA GGAAATAGTG GCGAGCGGGA GCCTTCCACA GAAGCAAGCC
GCCTTCGACC GGCTCGCCAC CTATATCCAT GAAAGTGGCG AGGCGGACGC CATCGCTGCA
CTGAATCGGG CCGCTTGCGA ACACGGCATC GATCCTCTTG CCATCACCGA GCGATTGACG
CTGGACGAGG CGGGACTTCG CAGGCTGATC AGGTGCCCGC TTGCAAGCCT CGGCGGGCAC
ACGATCAGCC ATCGCGCAAT CGCGCGGCTA GGCGACGGCG AAGCCCGCCG CGAAATCGCC
GGTTCCGCCG GGTGCGTAGA GGCGATCACG GGTCGCCGCC CGTCCACCTT CGCGTATCCC
TATGGTGACC GGCTTTCGGT GTCGCCACGC GATCACCGGC TGGTGGCGGA GCTTGGTATT
TCCGTCGCGG TGACGACGCA GCCGGCCATG CTTGCCGAGA CCACGAATCT CCATGCGCTG
CCGCGGATTT CGCTCAATGG CCATTTCCAG AACGCGCGCT ATGTCACCGC GCTCGGATCC
GGTATTCCGT TCCGGCTCTT CGCCCGGGGC GCAGGCTGA
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| Protein sequence | MKDGFAGLVR THVKRTAISG GLEAAHLLAR ARLMGAARGR GAVFTLHHVR PKVPRSFDPN
AHLEITPEFL EDAILTLKRD GYRFIPLDEL PSSLTFAGTR PLACFTLDDG YRNNLDHALP
VFERHGVPFT VFVTAGYAER THTLWWETLA ELLSVSRRFH FDFGTGEEIV ASGSLPQKQA
AFDRLATYIH ESGEADAIAA LNRAACEHGI DPLAITERLT LDEAGLRRLI RCPLASLGGH
TISHRAIARL GDGEARREIA GSAGCVEAIT GRRPSTFAYP YGDRLSVSPR DHRLVAELGI
SVAVTTQPAM LAETTNLHAL PRISLNGHFQ NARYVTALGS GIPFRLFARG AG
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