Gene Smed_0504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0504 
Symbol 
ID5321338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp546739 
End bp547938 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content62% 
IMG OID640789438 
Producthypothetical protein 
Protein accessionYP_001326195 
Protein GI150395728 
COG category[S] Function unknown 
COG ID[COG3214] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0989166 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATTC GCCTTTCCAA TCGCGATGCC CGCCGCATCT TTCTCGCCAA GCAGGGGCTT 
TCGGCCGCGC CGCATCGCGC GCTCGGCAAG GATGGCCTGC TGCAGTTGAT TCACGAGATC
GGCTTCGTGC AGGTCGACAG CATAGCGACC GTCGAAAGGG CCCATCATCA GATTCTCTTT
TCCCGTAATC AGACCTATCG CCGCGAGCAT CTGGCGGAGC TCCTGGAAAA GGACGGCGAG
CTCTTCGAGC ACTGGACCCA CGACGCTTCG ATCATCCCGA GCACCTTCTT CGTCTATTGG
AAGCATCGTT TCAAATGGGA GAGCGAAACG CTCCGCGAGC GGTGGCGCAA ATGGCGCGGA
GACGGTTTCG ATGCAAGCTG CGACGAAACG TATGAGCGGA TCGCCGCCAA CGGTGCCGTC
ATGTCGCGCG ATCTGAAGGA AGAGGGTCAC CAGTCCGGCG GCTGGTGGAA CTGGCATCCG
TCGAAGACGG CGCTGGAGGT GCTCTGGCGG CAGGGGAAGC TTGCGATCGC GCGCCGCGAA
AACTTCCAGA AGGTGTATGA TCTGACGGAA CGCGTCATTC CAGTCCGCCA TTACGAAGGC
GAGGTTGCGC ATGAGGAATT TATCGACTGG GCCTGCCGCA GCGCGCTCGA GCGGTTGGGC
TTTGCGACCC ACGGAGAGAT CGCGGCCTTC TGGGACCTCG TATCGCCGGA CGAGGCGAAG
GGCTGGGTCG CCGCCCATCG CGACGAGTTA TGCGACATCG TCATCGAGTC GGCCAATGGC
GGCAAGCCGC GCCCGTCCTA TGCTTTCGCG CACTTCCCGG ATGGTCTTGG CGACATTCCC
GAGCCACCCG GCCGCATCCG GGTGCTGAGC CCCTTTGATC CGCTGCTGCG CGACCGGAAC
CGGGCCGAGC GGCTTTTCGA TTTCTTTTAT CGCATCGAGG TTTTCGTGCC GGAGCCGAAG
CGGGAATATG GCTATTATGT CTTCCCTTTA CTCGAAGGCG ACCGGCTCAT CGGCCGCATC
GACATGAAGG CCGATCGCAG GGGTGGAAGC CTCGACGTGC GGCGCCTTTG GCTGGAGCGG
GGCGTCAGGG CATCATCGGG CCGAATGGAA AAGCTGATGG CCGAACTCGA TCGGGTTGCC
CGTTTTGCCG GCGTCGAGAA GGTCAAACTG CTCGAAAGCT GGAACGCTGC CCTTTCCTGA
 
Protein sequence
MTIRLSNRDA RRIFLAKQGL SAAPHRALGK DGLLQLIHEI GFVQVDSIAT VERAHHQILF 
SRNQTYRREH LAELLEKDGE LFEHWTHDAS IIPSTFFVYW KHRFKWESET LRERWRKWRG
DGFDASCDET YERIAANGAV MSRDLKEEGH QSGGWWNWHP SKTALEVLWR QGKLAIARRE
NFQKVYDLTE RVIPVRHYEG EVAHEEFIDW ACRSALERLG FATHGEIAAF WDLVSPDEAK
GWVAAHRDEL CDIVIESANG GKPRPSYAFA HFPDGLGDIP EPPGRIRVLS PFDPLLRDRN
RAERLFDFFY RIEVFVPEPK REYGYYVFPL LEGDRLIGRI DMKADRRGGS LDVRRLWLER
GVRASSGRME KLMAELDRVA RFAGVEKVKL LESWNAALS