| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0501 |
|---|
| Symbol | |
|---|
| ID | 5321335 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | - |
|---|
| Start bp | 544742 |
|---|
| End bp | 545305 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640789435 |
|---|
| Product | BioY protein |
|---|
| Protein accession | YP_001326192 |
|---|
| Protein GI | 150395725 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1268] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0382459 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACCA GAGATCTCGT CCTCATTGCG CTCTTCACCG CCATTATCGT CGTGCTCGGC
CTTGTACCGC CGATCACGCT CGGCTTCATT CCCGTTCCGA TCACGGCGCA GTCGATGGGC
GTGATGCTCG CGGGCTGCAT TATCGGCGCG AAGCGCGGGG GGCTCGCCTT CCTCCTCCTC
GTCCTGCTCG TCGCCATCGG ACTGCCTGTG CTTTCTGGCG GGCGCGGCGG GCTCGCGGTT
CTCGCCGGTC CTTCGGGCGG GTTCATCATC GGCTGGGCCG TTGCCGCCTT CGTTACGGGT
CTTGTCGCCG AGCACTTCGT CAAGCCTCAG ACCTCCGAGG CAAGCCAGTT TGCCGGCTTC
TTCTTCGCCT CCATCCTGGG CGGCATCGTG GTGCTCTATG GTATCGGCGT TCCGTGGCTT
TCGGCTATCA CCGGCACGCC TCTCCTCGCC GCCGCGACCG GATCGCTCGT CTTCATTCCG
GGCGACCTGC TGAAGGCCGC GATCGCGACA CTCGCGGCTC GCGCCGTCTA CGCAGGCTAT
CCGTTGCTGC CGGCGCGCGC CTGA
|
|---|
| Protein sequence | MNTRDLVLIA LFTAIIVVLG LVPPITLGFI PVPITAQSMG VMLAGCIIGA KRGGLAFLLL
VLLVAIGLPV LSGGRGGLAV LAGPSGGFII GWAVAAFVTG LVAEHFVKPQ TSEASQFAGF
FFASILGGIV VLYGIGVPWL SAITGTPLLA AATGSLVFIP GDLLKAAIAT LAARAVYAGY
PLLPARA
|
|---|
| |