| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0496 |
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| Symbol | |
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| ID | 5321330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 539700 |
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| End bp | 540629 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640789430 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_001326187 |
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| Protein GI | 150395720 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACGA AACTCTATGA AAACACGGTC TTCCTGGAGC ACGGCGTTCC CGAAGGGCAC
CCCGAACGTC CCGATCGGCT CAAGGCGCTG AACCTCGCGC TGGAGCACCC GAATTTCGCC
GATCTCGAGC GGGTCGAGGC ACCGATAGGC GATGAGGACC TGGTGCTGCT CGCCCATGCG
GAAGAGCATC TGCGGGGGGT CAAACGGGGG ATTCCGGACG AGGACATCAA CCAGCTCGAA
GCCGATACCT ATGCCACCCC CCAAAGCCTC GTGGCCGCAT TGACCGGTAT CGGCGGTGCT
GTCGCGGCCG TGGATGCCGT CTTCAAGGGC GAAGCGGACA ACGCCTTCAT CGCCGCCCGC
CCGCCCGGCC ACCACGCCGA GAAGAACAAG GTGATGGGCT TCTGTTTCTT CAACAACGTG
GCGATTGCAG CACGCTATGC GCAGAGGGCG CACGGGGCGG AGCGCGTCGC CATCGTCGAC
TGGGACGTCC ACCATGGCAA CGGTACGCAG GACATTTTCT GGGATGACCC TTCGGTGCTC
TTTTGCTCCA CCCACCAGAT CCCGCTTTAT CCCGGCACCG GAGCGAAGGA CGAAACGGGT
GTCAGGAACA ATATCGTCAA TGCGCCCCTT TCACCCAACA GCGGCAGCGA GCATTTCCGC
GACGCCTTCC GGACACGCGT GCTGCCGGCG CTCGAGAATT TCCGTCCCGA TCTCCTTCTG
ATCTCCGCCG GTTTCGATGC CCACCACCGC GATCCCCTGG CCCAGATCAA TCTGGTAGGA
GAGGATTTCG ACTGGGCGAC GGGTCGCCTC ATCGACATCG CCGGCAGGAG TGCCGGCAAC
CGCATCGTCA GCCTGCTCGA GGGCGGATAT GACTTGCAGG GACTCGCCGA ATCGGCCGGC
CTGCATATAC TGAGATTGAT GAGAGGGTAA
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| Protein sequence | MTTKLYENTV FLEHGVPEGH PERPDRLKAL NLALEHPNFA DLERVEAPIG DEDLVLLAHA
EEHLRGVKRG IPDEDINQLE ADTYATPQSL VAALTGIGGA VAAVDAVFKG EADNAFIAAR
PPGHHAEKNK VMGFCFFNNV AIAARYAQRA HGAERVAIVD WDVHHGNGTQ DIFWDDPSVL
FCSTHQIPLY PGTGAKDETG VRNNIVNAPL SPNSGSEHFR DAFRTRVLPA LENFRPDLLL
ISAGFDAHHR DPLAQINLVG EDFDWATGRL IDIAGRSAGN RIVSLLEGGY DLQGLAESAG
LHILRLMRG
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