Gene Smed_0488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0488 
Symbol 
ID5321322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp530441 
End bp531193 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content65% 
IMG OID640789423 
Productenoyl-CoA hydratase 
Protein accessionYP_001326180 
Protein GI150395713 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.308254 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACC ATGTGCTCGT TGAACGGCCG GAAGCCTATC CCGGAGTCCA GCTCATCCGC 
TTCAACCGGC CGGAGAAGAA GAACGCCATC ACGCGCGAAA TGTACGCCAA AATGACGGAA
GCGCTGACCG CTGCCGGGGC GGACCCCGCC ATTCGCGCGA CGGCATTTCT CGGAACGCAG
GGCTGCTTCT CGGCCGGCAA CGACATGTCG GACTTCCTCG CATTCGCCAT GGGGGGAAGT
ATGGGAGGGG AGGTTCTTGA TTTTCTCCGG GCTCTTGCGG GTGCGACGAA GCCGGTCGTC
TCGGGCGTCG ACGGATTGGC CATCGGCATC GGAACGACGA TCCACCTCCA CTGCGACCTG
ACGGTCTCCT CCGCCCGTTC GGTCTTCAAG ACTCCCTTCG TCGACCTGGC GCTCGTTCCG
GAAGCTGCCT CGAGCCTCAT CGCTCCACGC ATCATGGGTC ATCAGCGCGC CTTTGCCCTG
CTTGCAGCCG GCGAACCGCT CGACGCCGCC GGTGCGCGCG AGGCGGGGCT GATCTGGAAG
ATCGTGGATG AGCCTGCCGT GGAGGAGGAA ACGCTTTCCC TTGCCGGGCG CCTGGCAAGG
AAGCCGCCGG AAGCGCTGCG CATCGCCCGC GATCTCGTTC GCGGCGACCG CAGCGATGTG
CTTGCCCGCA TCGAGGAGGA GGCGAAGCAT TTTGCCGCGC AGTTGAAGAG TGCGGAAGCA
CGGGCCGCGT TCGAAGCCTT CATGCGTCGG TAG
 
Protein sequence
MTDHVLVERP EAYPGVQLIR FNRPEKKNAI TREMYAKMTE ALTAAGADPA IRATAFLGTQ 
GCFSAGNDMS DFLAFAMGGS MGGEVLDFLR ALAGATKPVV SGVDGLAIGI GTTIHLHCDL
TVSSARSVFK TPFVDLALVP EAASSLIAPR IMGHQRAFAL LAAGEPLDAA GAREAGLIWK
IVDEPAVEEE TLSLAGRLAR KPPEALRIAR DLVRGDRSDV LARIEEEAKH FAAQLKSAEA
RAAFEAFMRR