| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0477 |
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| Symbol | ubiA |
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| ID | 5321311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 515828 |
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| End bp | 516793 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640789412 |
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| Product | 4-hydroxybenzoate polyprenyltransferase |
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| Protein accession | YP_001326169 |
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| Protein GI | 150395702 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
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| TIGRFAM ID | [TIGR01474] 4-hydroxybenzoate polyprenyl transferase, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.036458 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGCTATGA ACAGCTCTTC CATCGATTCC GGCCGCGTCC ACGATGCGCC GTCCAACAAT
TGGGTCTACC GGGTCTTGCC GCGAGCGCTA TGGCCCTATG CGCAGCTCGC CCGCTGGGAC
CGTCCGATCG GCTGGCAATT GTTGATGTGG CCATGCCTCT GGTCCGCCGC GATGGCAGCC
GGAGCGGCCG CATCGCTCGG CAGCTTCTCG GCCGGGCGTT TCCTCTTCCA TATCTTTCTC
TTCATCGTCG GGGCGATCGC CATGCGTGGC GCCGGCTGCA CCTACAACGA CATCGTCGAT
CACGATATCG ACATGGAAGT CGCTCGTACA CGCTCGCGCC CGCTACCTTC CGGTCGCGTA
ACGCGCTTCC AGGCGAAGGC ATTCATGTTG CTGCAGTCGG TTGTGGGTCT TGCCGTCCTG
CTACAGTTCA ACGGGTTCAC GATTTTTCTC GGCGTGCTGT CGCTCGCGTT GGTGGCGATC
TATCCGTTCG CCAAGCGCTT TACGGATTGG CCGCAATTCT TCCTCGGCCT CGCCTTCTCC
TGGGGCGCGA TCATGGGCTG GGCGGCGGAA TTCGGCAGCC TGTCCTTCGC GCCGGTCATG
CTCTACGCGG CGGCCATCAC CTGGACGATC GGCTATGACA CGATCTATGC CTATCAGGAC
AGGGAGGACG ACGAACTGAT CGGCGTTCGC TCGACAGCCC GCCGCTTCGG CGACAATCCG
CGGCCGTGGC TGATCGGGCT CTATGGGATC GCCGTTCTCC TGATGCTTTT CGCGTTCCTC
GCGGCCGGCG CCGGCTTCTT CGCCTATCTA GGGCTTGTGG TGGCGGCGGT GATGCTCGCC
TATCAGATAC TGGTGTTGAA CATCCACGAT CCGCTGCAAT GCCTCGCGCT GTTCAAGTTC
AACGGCGTCG TCGGCCTCAT CATCTTTGCC GGACTGGTGC TCTCGCTTCT CGTTCGCCTG
ATATGA
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| Protein sequence | MAMNSSSIDS GRVHDAPSNN WVYRVLPRAL WPYAQLARWD RPIGWQLLMW PCLWSAAMAA
GAAASLGSFS AGRFLFHIFL FIVGAIAMRG AGCTYNDIVD HDIDMEVART RSRPLPSGRV
TRFQAKAFML LQSVVGLAVL LQFNGFTIFL GVLSLALVAI YPFAKRFTDW PQFFLGLAFS
WGAIMGWAAE FGSLSFAPVM LYAAAITWTI GYDTIYAYQD REDDELIGVR STARRFGDNP
RPWLIGLYGI AVLLMLFAFL AAGAGFFAYL GLVVAAVMLA YQILVLNIHD PLQCLALFKF
NGVVGLIIFA GLVLSLLVRL I
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