Gene Smed_0476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0476 
Symbol 
ID5321310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp514953 
End bp515759 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content61% 
IMG OID640789411 
ProductMltA-interacting MipA family protein 
Protein accessionYP_001326168 
Protein GI150395701 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3713] Outer membrane protein V 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0445129 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGCATCC CTGTTGTTTT GCTCGCGTCT CAGGCTTTCC TCCTTTCGGC TGGTGTCGCT 
TCGGCCGAAG ACCGTCAGTA TCCATGGTCG GGGGACTGGT ACCTGAAGGT CGGCGCCACC
GGCTTTCTCG GTCCGGAATA TGAAGGCAGC TCAAAGACGA TGCTTCAGGC GGCGCCGCTC
GTTTCGATGG GCAAGGTGGG AAGCAGCGTG CGCTTTTCGT CCCGCAACGA CAACATATCC
TATGCCTTGG TCGATCACGT CCACTTTCGT GCCGGTGCTG TCGGCAAACT GATCTTCGAG
CGCGATGAAG ATGCCTCTGA CGATCTCAAA GGCCTCGACC CGGTGAAATT CGGCGGCGAA
CTCGGCGGTT TCGCCGAGTT CTACCCCACG GACTGGATGC GTTTCCGCGC TGAAGTCCGT
CAGGGTATCC GCAGCCATCA CGGGGTGGTC GCCGATATTA CGGCCGACGC CTTCACGGAT
GTCAGCGAAA CGATCCGCAT TTCGGCCGGA CCGCGACTGA CCGCGGCAAC AAGCGATTAT
TTCGACGCCT ACTACGGCGT CAACGCTGCA GAGTCAGCAG CTTCGGGCCT CGGTACCTAT
GACCCCGATG GCGGCATTCA TTCCGTGGGT CTGGGCGCGG CGATCAACTG GCAGGCGACG
GAGAAGCTGG AGACGGGCGC CTATGCCGAA TATCGTCGAC TGCTGGGTGC GGCCGCCGAT
TCAAGCCTCG TCAACGAGCG CGGCAGCCGC GACCAGTTCC TCGTCGGCGT ATCCGCGACC
TACCGCTTCG ATTTTACGCT ACCCTGA
 
Protein sequence
MRIPVVLLAS QAFLLSAGVA SAEDRQYPWS GDWYLKVGAT GFLGPEYEGS SKTMLQAAPL 
VSMGKVGSSV RFSSRNDNIS YALVDHVHFR AGAVGKLIFE RDEDASDDLK GLDPVKFGGE
LGGFAEFYPT DWMRFRAEVR QGIRSHHGVV ADITADAFTD VSETIRISAG PRLTAATSDY
FDAYYGVNAA ESAASGLGTY DPDGGIHSVG LGAAINWQAT EKLETGAYAE YRRLLGAAAD
SSLVNERGSR DQFLVGVSAT YRFDFTLP