Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0476 |
Symbol | |
ID | 5321310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 514953 |
End bp | 515759 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640789411 |
Product | MltA-interacting MipA family protein |
Protein accession | YP_001326168 |
Protein GI | 150395701 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3713] Outer membrane protein V |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0445129 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCGCATCC CTGTTGTTTT GCTCGCGTCT CAGGCTTTCC TCCTTTCGGC TGGTGTCGCT TCGGCCGAAG ACCGTCAGTA TCCATGGTCG GGGGACTGGT ACCTGAAGGT CGGCGCCACC GGCTTTCTCG GTCCGGAATA TGAAGGCAGC TCAAAGACGA TGCTTCAGGC GGCGCCGCTC GTTTCGATGG GCAAGGTGGG AAGCAGCGTG CGCTTTTCGT CCCGCAACGA CAACATATCC TATGCCTTGG TCGATCACGT CCACTTTCGT GCCGGTGCTG TCGGCAAACT GATCTTCGAG CGCGATGAAG ATGCCTCTGA CGATCTCAAA GGCCTCGACC CGGTGAAATT CGGCGGCGAA CTCGGCGGTT TCGCCGAGTT CTACCCCACG GACTGGATGC GTTTCCGCGC TGAAGTCCGT CAGGGTATCC GCAGCCATCA CGGGGTGGTC GCCGATATTA CGGCCGACGC CTTCACGGAT GTCAGCGAAA CGATCCGCAT TTCGGCCGGA CCGCGACTGA CCGCGGCAAC AAGCGATTAT TTCGACGCCT ACTACGGCGT CAACGCTGCA GAGTCAGCAG CTTCGGGCCT CGGTACCTAT GACCCCGATG GCGGCATTCA TTCCGTGGGT CTGGGCGCGG CGATCAACTG GCAGGCGACG GAGAAGCTGG AGACGGGCGC CTATGCCGAA TATCGTCGAC TGCTGGGTGC GGCCGCCGAT TCAAGCCTCG TCAACGAGCG CGGCAGCCGC GACCAGTTCC TCGTCGGCGT ATCCGCGACC TACCGCTTCG ATTTTACGCT ACCCTGA
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Protein sequence | MRIPVVLLAS QAFLLSAGVA SAEDRQYPWS GDWYLKVGAT GFLGPEYEGS SKTMLQAAPL VSMGKVGSSV RFSSRNDNIS YALVDHVHFR AGAVGKLIFE RDEDASDDLK GLDPVKFGGE LGGFAEFYPT DWMRFRAEVR QGIRSHHGVV ADITADAFTD VSETIRISAG PRLTAATSDY FDAYYGVNAA ESAASGLGTY DPDGGIHSVG LGAAINWQAT EKLETGAYAE YRRLLGAAAD SSLVNERGSR DQFLVGVSAT YRFDFTLP
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