| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0475 |
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| Symbol | |
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| ID | 5321309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 513759 |
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| End bp | 514574 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640789410 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001326167 |
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| Protein GI | 150395700 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0515677 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGATAT CCGATGGAAG CTACCTGCCG AAGTTGCCCG ACGCTGACCA TTTCAGAAGC
CTGGAATGGA TCGAGAAGGC GAACGCACCC GTTCTGGCGA TTGGGAAGGA TTACGCATGC
GGCCTCGTCG TGCCTCCCCA CAGCCATAGC CGGACCCAAC TCTGGTGGGC GCGTTCAGGC
GTTGTGCTCG TCTACACCTC GGGCGGGCGC TGGATGATCC CTCCCGGTCA TGCCCTGCTG
ATCCCCGCGG GAATTGAGCA CTCGGCCGAG ATGGTCAGCG ACGTCCGCAT GCATTCGACT
TACATACCGC CAGAGGCAAG CGAAGCGCGC CGGCCTCTCG TGTTGGAGAT GAGCCCGCTC
GTCGGCAGTC TCATCGACGA ACTTATCGTT GCAGGGAACG AAGCATCTAC CGAGAAGCGC
GAGAGCCTGA TCATGGAATT GCTGCTCACG GAAATCCCTC GGCTCTCTCA GAGGCCTCTG
GGTCTGCCTT TCCCGCGGGA CCGCAAGCTT GCGGTTATCT GTCGGCAATT TGTCGAGGCG
CCGTCGGCAT CCGCGAGCAT CGATGCGTGG GCGGCGAGCA TGGGCATCAG CCGACGTTCT
TTTACGCGGC TCTTCCGGCA GGAGACGGGC GTCAGCTTCG GCACATGGCG GCAGCAGGCC
TGCATCTTCG CTTCGCTGCC TCGCATTGCC GACGGTGAAC CGATAACCAC GGTTGCGTTG
GATGCCGGTT ACGAGAACGT CGCTGCCTTC ACGACCATGT TCCGCCGCAT GCTCGGCGCG
CCGCCCAGCG TCTATCTACG CGACCAGCGG ACCTGA
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| Protein sequence | MPISDGSYLP KLPDADHFRS LEWIEKANAP VLAIGKDYAC GLVVPPHSHS RTQLWWARSG
VVLVYTSGGR WMIPPGHALL IPAGIEHSAE MVSDVRMHST YIPPEASEAR RPLVLEMSPL
VGSLIDELIV AGNEASTEKR ESLIMELLLT EIPRLSQRPL GLPFPRDRKL AVICRQFVEA
PSASASIDAW AASMGISRRS FTRLFRQETG VSFGTWRQQA CIFASLPRIA DGEPITTVAL
DAGYENVAAF TTMFRRMLGA PPSVYLRDQR T
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