| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0474 |
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| Symbol | |
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| ID | 5321308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 512451 |
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| End bp | 513647 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640789409 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001326166 |
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| Protein GI | 150395699 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.812694 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACGG TCACGTCCGC GGGCAGCATC AGCCCCGAAA AGACAGCATT CTCGGTCATT
TTGGCAGTCA GCTTCTGCCA CATGCTGAAC GACATCATGC AATCGCTGCT GACGGCGCTC
TATCCTTTGC TCAAAGAAAA CTACGCTCTC GATTTCGTCC AGATCGGCCT TTTGACATTC
ACGTTCCAGG TGACGGCTTC GATGCTGCAG CCGCTCGTCG GCATCGTGAC GGATCGTTGG
GCCCTGCCCT ATTCGCTGCC CTTCGCCATG CTCTCGACCT GCATGGGCCT GCTGCTCCTC
GCCAATGCCG ACCACTTCTG GATGCTGCTT GTCGCAGCGA GCCTGATCGG CATCGGATCG
GCGATCTTCC ATCCGGAATC CTCCCGCGTG GCCCGCCTCG CCTCGGGCGG TCGCCACGGC
TTGGCGCAGT CGCTGTTCCA GGTCGGCGGC AATGCCGGAA GCGCGCTGGG GCCGCTGCTG
GCCGCTTTCA TTGTTCTCCC TTTCGGACAG GGCAGCCTCG GCTGGTTTTC CGTCGTCGCG
ATCACGGGGT TCTTCGTGCT CTCCTGGGTG AGCACGTGGT ACGTGCGCCA CCGTCGCTCG
ACCATGAGCC GCCCTGTCCC GAGCCGGGTG CTGCCGCTGC CGAAGACGCG CGTCATGTGG
ACGATTGCGA TCCTCGTCCT GCTGACGGCG ACGAAGAACG TCTACCTCAC CAGCATCTCG
AGCTACTTCA CCTTCTTCGC CATTGAAAAA TTCGGCACGA GCGTACAGCA GGCGCAGTTG
ATGCTTTTCC TGTTCCTCGG CTCGGCAGCC GCAGGCACGT TCCTCGGAGG CCCGATCGGC
GACCGGTTCG GCGCGCGCTT CGTCATCTGG TTCTCGATCC TCGGCGTCGT GCCGTTCACC
CTTCTGCTGC CCTATGCAAA CCTTTTCTGG ACGGGCGTGC TGAGCGTCAT CATCGGCCTT
ATCTTTTCGT CGGCCTTCTC GGCGATCGTC GTCTTCGCGC AGGAACTCGT TCCGGGCAGG
GTGGGGCTCA TCGCCGGTGT CTTCTTCGGC TTTGCCTTCG GCGCCGGCGG CATGGGCGCC
GCGGTTCTCG GGGTCGTCGC CGACCGGCAG GGAATCGAGT TCGTCTACCT GATCTGCTCG
TATCTCCCGC TCCTCGGACT GCTCACCATA TTTTTGCCGA AGCTGCCTGC GCGATAG
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| Protein sequence | MATVTSAGSI SPEKTAFSVI LAVSFCHMLN DIMQSLLTAL YPLLKENYAL DFVQIGLLTF
TFQVTASMLQ PLVGIVTDRW ALPYSLPFAM LSTCMGLLLL ANADHFWMLL VAASLIGIGS
AIFHPESSRV ARLASGGRHG LAQSLFQVGG NAGSALGPLL AAFIVLPFGQ GSLGWFSVVA
ITGFFVLSWV STWYVRHRRS TMSRPVPSRV LPLPKTRVMW TIAILVLLTA TKNVYLTSIS
SYFTFFAIEK FGTSVQQAQL MLFLFLGSAA AGTFLGGPIG DRFGARFVIW FSILGVVPFT
LLLPYANLFW TGVLSVIIGL IFSSAFSAIV VFAQELVPGR VGLIAGVFFG FAFGAGGMGA
AVLGVVADRQ GIEFVYLICS YLPLLGLLTI FLPKLPAR
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