| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0465 |
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| Symbol | |
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| ID | 5321299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 501166 |
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| End bp | 503100 |
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| Gene Length | 1935 bp |
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| Protein Length | 644 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640789400 |
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| Product | putative transmembrane signal peptide protein |
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| Protein accession | YP_001326157 |
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| Protein GI | 150395690 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4907] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.559326 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.552522 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGCGGC TTTTAGCGGC GCTTGCGCTC GTCTTTTTCG TTCTTGCAAT GCCGCTAGAC
GCGGCGGCGG AAGAGTTTAT CTCCGCCTAC CATTCGGTGA TCGGCGTCGC AAAGGACGGC
ACGCTGACGG TAACCGAGAC GATTACGGCC AATGTGGAGG GAAACCAGAT AAGGCGCGGC
ATCTACCGCG ACTTTCCGTT GACCTTCGTC GATGAGCGCG ACCGCCGCAG CAAGGTCGAC
TTCAAACTCC TCTCCGTCGA GCGGGATGGC GATGATGAGG ATTACCGGAC CGAATCGATC
AACGGCGGCA TCCGCATCTA CACCGGGAAC GCCGACGTTC TGCTGCCGCA TGGCGAGCAC
ACCTTCCAGA TCACCTATGA GACGAGCCGG CAGATACGCT TCTTCGATGA TCACGACGAA
CTCTACTGGA ATGTGACGGG AACCGAATGG GCATTTCCGA TCGAGGAGGC CACGGCCACC
GTGACACTGC CTGATGGAGT GAAGGCGAAG GCGCTCGACG TCTTTACCGG CGGCTACGGG
GCGACGGAAA AAGATGCGCG GGCGGTGGAG GAGGGTGACG AAATCTTCTT CGCGACGACG
CGCCGGCTGC GCCCGCAGGA AGGATTGACC GTCGCGATCA AGCTGCCCAA GGGCAGCATC
GAGCGCCCCA CTCCTTCGCA GGAAAATATC TGGTGGCTGC GCGACCACGC GGCCCTGGTC
ATCGCCGGAG CCGGCCTCCT CTTCGTGACG CTTTATTACG GGCGCGCCTG GATTCGTGTC
GGCCGCGACC CGACGCGCGG GGTCATGGTC CCGCGCTGGG ATCCTCCGGA GGGTGTCTCG
CCCGCGCTGG TCAACTACAT CGACAACAAG GGTTTTTCCG GCGGGGGATG GACGGCTCTC
TCAGCTGCGG CGCTCAACCT TGCGGTGCGG GGACATGTTG TCCTGGAAGA CCTGAAGAAT
GCGATCATCA TCACCGCCAC GGGCAAGACC GGTGAAAAGC TGCCGACCGG CGAAGCGGCC
TTGATGAGGG CGGTCGAAGC CGCTGACGGC AAGCTCACCA TCGACCGCGA GAATGGGAAG
AGGATTCAGG CCGCCGGTTC CGGCTTTCGC AGCGCGATGG AGCGCGAGCA TCGTGGAAAG
TATTACCGCG CCAATAAGAG CTACGTCGTC GTCGGCATCG TTCTTTCGGC CGCCACCCTC
GCGGCGCTGC TCATCTTCGG CGGCTTGAGC GAGGACAGCA TTCCTTTCGT GATCGTCCCG
GTTTTTCTCG CCGTCTTTAT TGCCGCCTTC GCCGTGTCGG TCGGCAAATC GTTCCGGCGC
AGCTCGAGCC TCAGACGCCG AATCCTTTCG ATCGTGGTCC TGGCTTTCAT GGGCTTCGTG
CTCTTCACCG AATTTTCGAG CATTCTCGCC GCGCTCGTCT TTTCAGCCAG CGACCCAGCC
GACCTGCCGT TGTTCTTCGC AATCGGCGGC ATCGTCCTCG TGAACGGGCT GTTCTATTTT
CTCATGGGCG CGCCCACACC GCTGGGTACG CGCATGATGG ATGGTATCGA CGGTCTCAGG
CAATACCTGA CGCTCGCCGA AAAGGACCGG CTGAACATGC AAAGCGCGCC GGAAATGTCG
CCCCGGCATT TCGAAACCCT GCTTCCTTAT GCAGTGGCTC TCGGAGTGGA GAAGCCCTGG
AGCGAGACCT TCGAGCGCTG GCTGCTTGCA GCTTCCGCCG GCGCGGCTGC GGCCGCCTAC
CAGCCGAGCT GGTATCATGG CGATTCCTTC GGCCCCGGAT CCTTCACCGA CACGATCGGC
GGTTTGGCCG GTTCGATGAC GGATAAGATC ACGTCTTCCT TGCCGCCGCC GGCCAGGAGT
TCGTCCTCCG GCTTTTCCTC CGGCGGCGGG TTTTCCGGCG GCGGCGGAGG AGGTGGCGGC
GGCGGCGGCT GGTGA
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| Protein sequence | MRRLLAALAL VFFVLAMPLD AAAEEFISAY HSVIGVAKDG TLTVTETITA NVEGNQIRRG
IYRDFPLTFV DERDRRSKVD FKLLSVERDG DDEDYRTESI NGGIRIYTGN ADVLLPHGEH
TFQITYETSR QIRFFDDHDE LYWNVTGTEW AFPIEEATAT VTLPDGVKAK ALDVFTGGYG
ATEKDARAVE EGDEIFFATT RRLRPQEGLT VAIKLPKGSI ERPTPSQENI WWLRDHAALV
IAGAGLLFVT LYYGRAWIRV GRDPTRGVMV PRWDPPEGVS PALVNYIDNK GFSGGGWTAL
SAAALNLAVR GHVVLEDLKN AIIITATGKT GEKLPTGEAA LMRAVEAADG KLTIDRENGK
RIQAAGSGFR SAMEREHRGK YYRANKSYVV VGIVLSAATL AALLIFGGLS EDSIPFVIVP
VFLAVFIAAF AVSVGKSFRR SSSLRRRILS IVVLAFMGFV LFTEFSSILA ALVFSASDPA
DLPLFFAIGG IVLVNGLFYF LMGAPTPLGT RMMDGIDGLR QYLTLAEKDR LNMQSAPEMS
PRHFETLLPY AVALGVEKPW SETFERWLLA ASAGAAAAAY QPSWYHGDSF GPGSFTDTIG
GLAGSMTDKI TSSLPPPARS SSSGFSSGGG FSGGGGGGGG GGGW
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