Gene Smed_0464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0464 
Symbol 
ID5321298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp500507 
End bp501055 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content61% 
IMG OID640789399 
ProductLemA family protein 
Protein accessionYP_001326156 
Protein GI150395689 
COG category[S] Function unknown 
COG ID[COG1704] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.415614 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGGC TGGCAATTGG CGTCGCCGTT ATTCTTTATC TCGTTTTCGC CTATAACGGC 
CTCGTCAAGG CGCGCCAGAT GGCCGAGGAA GCCTGGTCCG GCATCGACGT GCAGCTGAAG
CGCCGCGCTG ACCTCATCCC GAACCTCGTC GAGACGGTGA GGGGCTACGC CGCCCATGAA
AAATCGACGA TCGAAGAGGT CGTCGCCCTT CGCAACCGTG CCCGGGCGGT CCCGGAAGGC
GACGTTGCGG CACGGGCTGC CGCCGAGGGC GCGCTGTCGC AGGCGCTTGG CCGGCTCTTT
GCGCTTGCCG AAGCCTATCC GGACCTGAAG GCCAACGAGA ATTTCGTGGA ACTCCAGCGT
TCGTTGGAGA CGATCGAAGG CGAGATCCAG ATGTCCCGGC GCTATTACAA CGGCGCGGCG
CGCGATCTCA ACGTCAAGGT CGAGAGCTTT CCCTCGAATC TGATCGCCAA CGTTTTTCGT
TTCGCCAAAG CCAACTATTT CGAGATCACC AACGAAGCGG ACCGTGCGGT CCCTTCGGTC
AAGTTCTAA
 
Protein sequence
MIGLAIGVAV ILYLVFAYNG LVKARQMAEE AWSGIDVQLK RRADLIPNLV ETVRGYAAHE 
KSTIEEVVAL RNRARAVPEG DVAARAAAEG ALSQALGRLF ALAEAYPDLK ANENFVELQR
SLETIEGEIQ MSRRYYNGAA RDLNVKVESF PSNLIANVFR FAKANYFEIT NEADRAVPSV
KF