| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0456 |
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| Symbol | |
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| ID | 5321290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 492620 |
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| End bp | 493531 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640789391 |
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| Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
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| Protein accession | YP_001326148 |
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| Protein GI | 150395681 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
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| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.497247 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCCAG ACGGGATTGC GGGCTTCGCG CTGACGATTG CGGCGCCCGC CAAGATCAAT
TTGGCGCTGC ATGTCGTCGG CCAGCGGGCC GACGGCCATC ATCTGCTTGA AAGCCTGGTT
ACCTTTGCAG AGTGCGGTGA CGGGATCGGA CTGGCAGCGG CGGAGGCGGA CCATTTCACC
GTGTCGGGCC GATTCGCGCC CGACCTGTCG CCTTCGGCCG AAAACACCAG CGGCAATCTC
GTGCTTCGCG CCCGCGATGT TTTGCGGCGT GAGCTTGCGT CACAAGGTAG AGCTGCCGGC
CCGGTTCATC TGCATCTTGA GAAGAACCTG CCTGTTGCTT CGGGAATCGG CGGCGGTTCG
GCCGATGCAG CCGCGACGCT GCGCGGGCTG CTGTCCCTCT GGGGTGCGTC CCTCGAGCCT
GCCCGGCTCG GCAGCCTGGC GCTGGAGCTC GGCGCAGACG TGCCGATGTG CCTTGACGGC
CGACCCCTGA TTGCAAGAGG GATCGGCGAG GAAATCACGT CTATTCCCGA CCTGCCGTCC
TTCGCGATCG TCCTCGTCAA TCCTCTTGTC GAGGTCTCGA CGCCGGTTGT GTTCCGCTTG
CTCATCAGAA AATCCAACCC CCCTCTCGTC TTGCCTGAAA ATCTCCGCTC GACAGCCGCG
TGGTTAGCGG CCCTGGCTTC CATGCGGAAC GATCTGGAGC CCCCGGCACG GGCACTCGAG
CCGATGATCG AAGCGGTCTC GACCGCACTG GAGGACGCAG GCGCTACGCT GGTGCGGATG
TCCGGCTCGG GCGCCACCTG CTTCGGACTG TTCGCCGACG AGAAAAGTGC GTCGCTTGCC
GCCGAGACCA TTTCCGCCAG CCAACCGCGA TGGTACGTTC GAGCGACGCG AACCGCGGGA
AAATCAGGAT AG
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| Protein sequence | MRPDGIAGFA LTIAAPAKIN LALHVVGQRA DGHHLLESLV TFAECGDGIG LAAAEADHFT
VSGRFAPDLS PSAENTSGNL VLRARDVLRR ELASQGRAAG PVHLHLEKNL PVASGIGGGS
ADAAATLRGL LSLWGASLEP ARLGSLALEL GADVPMCLDG RPLIARGIGE EITSIPDLPS
FAIVLVNPLV EVSTPVVFRL LIRKSNPPLV LPENLRSTAA WLAALASMRN DLEPPARALE
PMIEAVSTAL EDAGATLVRM SGSGATCFGL FADEKSASLA AETISASQPR WYVRATRTAG
KSG
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