Gene Smed_0447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0447 
Symbol 
ID5321281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp485209 
End bp485961 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content58% 
IMG OID640789382 
ProductF0F1 ATP synthase subunit A 
Protein accessionYP_001326139 
Protein GI150395672 
COG category[C] Energy production and conversion 
COG ID[COG0356] F0F1-type ATP synthase, subunit a 
TIGRFAM ID[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.726542 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.18577 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCAAACG ATCCGACCCA TCAGTTCCTG GTCAACAAGA TTGTCTCGAT CGACATTGGC 
GGAATCGACT TTTCCTTCAC CAATGCGTCG CTGTTCATGG TGGCCACGGT CGGTGCGGCC
GCTGGATTCC TCTATCTGAC GACATCGCAG CGCGGTCTGA TCCCGACGCG CATGCAGTCG
GTGTCGGAGA TGTCCTACGA GTTCATTGCC TCCATGCTTC GCGAGGGGGC CGGCAGTCAG
GGAATGAAAT TCTTCCCCAT GGTCTTTTCG CTGTTCATGT TCATCCTGAC GGCGAACCTG
CTCGGCATGG TGCCCTATTT CTTCACCGTC ACCAGCCAGA TCATCGTGAC CTTCGCGCTT
GCGGTCTTCG TGATCGGCAC GGTCATTCTC TACGGCTTCT ATAAGCACGG TTTCGGCTTC
CTCAAGCTTT TCGTGCCGCA TGGCGTGCCG GGCGCGCTCC TGCCGCTGGT CGTGGCGATC
GAAATCATCT CGTTCCTTTC CCGTCCCATC AGCCTCTCGG TCCGTCTATT CGCCAACATG
CTGGCTGGCC ATATCACGCT GAAGGTATTC GCAGGCTTCG TCGCCTCGCT CAGCGCATTC
GGTGCGCTCG GCATCGGCGG CGCGATCCTG CCGCTCATCA TGACCGTCGC CCTTACCGGT
CTTGAGTTCC TCGTCGCCTT CCTCCAGGCC TATGTCTTTG CGGTGCTGAC CTGCATGTAC
CTCAATGACG CTGTCCATCC GGGAAGCCAC TAA
 
Protein sequence
MSNDPTHQFL VNKIVSIDIG GIDFSFTNAS LFMVATVGAA AGFLYLTTSQ RGLIPTRMQS 
VSEMSYEFIA SMLREGAGSQ GMKFFPMVFS LFMFILTANL LGMVPYFFTV TSQIIVTFAL
AVFVIGTVIL YGFYKHGFGF LKLFVPHGVP GALLPLVVAI EIISFLSRPI SLSVRLFANM
LAGHITLKVF AGFVASLSAF GALGIGGAIL PLIMTVALTG LEFLVAFLQA YVFAVLTCMY
LNDAVHPGSH