Gene Smed_0443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0443 
Symbol 
ID5321277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp480223 
End bp481200 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content60% 
IMG OID640789378 
Productmagnesium and cobalt transport protein CorA 
Protein accessionYP_001326135 
Protein GI150395668 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0598] Mg2+ and Co2+ transporters 
TIGRFAM ID[TIGR00383] magnesium Mg(2+) and cobalt Co(2+) transport protein (corA) 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0358301 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACAG GCTATTGCGT CAACGGCGAA GCTGTTGCGC TCTCGACGGC GGAGCCGCCG 
TCGGCCCTGC GTCCCGATCT CGTCTGGATC GACCTTGTCG AGCCGACCAA GGCGGAAGAC
CTGATGATCG AAAGCCTGCT CGGCATACCC ATTCCGACGC GGGACGAGTT GAGGGACATC
GAGCCATCGA GCAGGCTTTA TACAGATGAT GGTGCCGTCT TCATGACGGC GTCGCTCGTC
TATAGAAGCG ACACGGAAAT GCCGGGCCTC ACGGATGTTG GCTTTATCCT GGCAGGCAAA
CGTCTTGTCA CCGTACGCTA TGCCGAGCCA AGGGCTTTCG GGCTTTTCAA GGCCAGCGTT
CATCGCATTT CCGGCGGCTG CCGCAACGGC GCGGTGATTC TGACGCGCCT GCTCGAGACG
ATCGTCGACC GTACGGCGGA AATCCTTGAA CAGGCAGTGG ACAAGATCGA CGATCTGGCG
CTGCAGGTTT TTGGCGACAA GGCCTCGACC AGGCGCAGGC CGCCGCACTT CCTCGAAGCA
CGGCTACGCG ATGTCGCTGG ACATCACCGG CTTGTTGCCA AGACGCGCGA CAGCCTCGCT
TCGCTTTCGA GGCTGTTGAG CTTCGTCTAT ACGGTCTCCG ACGTGCAGGC GGACAAGGAA
AGCCGCGAAC TCTGCCGCAC TGTTTCGCGC GACATACAGT CGCTTTCGGA GCATACGGCC
TTCATCTCGG GAAACATCAC CTTCCTGCTT GATGCTTCGC TCGGCCTTAT CAATGTCGAG
CAGAACGCCA TCATCAAGAT CTTCTCGATC GCGTCCGTCG TTCTGCTGCC GCCGACGCTG
GTGGCGTCGG TTTACGGGAT GAACTTCCGC ATGATGCCCG AACTCGAATG GCAGTTCGGC
TATCCGTGGG CGCTTGCGGT CATGGTCCTT TCGGCCGTGA TTCCGTTTTT CTTCTTCCGC
TGGAAAGGCT GGCTCTAG
 
Protein sequence
MITGYCVNGE AVALSTAEPP SALRPDLVWI DLVEPTKAED LMIESLLGIP IPTRDELRDI 
EPSSRLYTDD GAVFMTASLV YRSDTEMPGL TDVGFILAGK RLVTVRYAEP RAFGLFKASV
HRISGGCRNG AVILTRLLET IVDRTAEILE QAVDKIDDLA LQVFGDKAST RRRPPHFLEA
RLRDVAGHHR LVAKTRDSLA SLSRLLSFVY TVSDVQADKE SRELCRTVSR DIQSLSEHTA
FISGNITFLL DASLGLINVE QNAIIKIFSI ASVVLLPPTL VASVYGMNFR MMPELEWQFG
YPWALAVMVL SAVIPFFFFR WKGWL