| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0441 |
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| Symbol | |
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| ID | 5321275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 477535 |
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| End bp | 478395 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640789376 |
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| Product | regulatory protein LuxR |
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| Protein accession | YP_001326133 |
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| Protein GI | 150395666 |
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| COG category | [K] Transcription |
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| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.923746 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0183899 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACAGGT TTTGTGCTCC AGACTTGATG AACGTCAATC ATCTGTTGGC ATTGCTCGAC
CGCTCGGGCT ATTTGATAGC CGACGACTGC GATGGAACCG CGCGAATGCC AGATATGATC
ACGATGGCGA TGACTGATAT CGATCTGCCC CGGGGCGGCG ATTTCGCGTC TGAGATAGCA
AGGCTCGAAA CGCAGTTCGA CATCATCCGC TACATGCGGC GGATTACGCA GATCTTCGGC
TTCAAGACTT TTCTCATCTG TTCAATTCCG GCAGTCGAGG TGGAGCGCCT CTCAGCCACC
ACGGTCATAT CGAACATGCC CGCGGAGCTT CTCAACAAAT ATGACAGTCT TTCTATGCTG
CGCTTCAGCA CCGGGGTGCG CCGCTTGCGC GAGACCACGA CGCCGTTTCA GATCCTGCTC
GAGGACTGGG AGAAGGAGGG AGGCAAGCCG GACGCTGCCG CCGATTATTT TGCCATGCTG
CGCGAAAATG GCCTGCTCCA GGCCAACTAC TTCCCGGTCC ACGATGCCGA AGGCGGTCGG
GGCGCGGTCA TCCTCATGGG CCCGGAGGCG GGATTGCCGA TGACGGCGGC TATGGAACTG
CAGATGATCG CCATCCACGT CTATAACCGC CTCGCAGAGA TAGGCTCGGT CTGGAAGAAC
ACCAACACCG TTCTTTCCGA GCGGGAAATC CAGTGCCTGA ACTGGACGGC CGCCGGAAAG
ACCAGCTCCG AAATCGCCGG TATCCTTGGC CTGTCCGAGC ACACGGTCAA TCATTACCTC
AACCATGTCA CCAAGAAGCT CGACGCGGTG AACCGCACAC AGGCGGTCGT GAAGGCGATG
AAAAAGGGCT ACATAAGCTA G
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| Protein sequence | MHRFCAPDLM NVNHLLALLD RSGYLIADDC DGTARMPDMI TMAMTDIDLP RGGDFASEIA
RLETQFDIIR YMRRITQIFG FKTFLICSIP AVEVERLSAT TVISNMPAEL LNKYDSLSML
RFSTGVRRLR ETTTPFQILL EDWEKEGGKP DAAADYFAML RENGLLQANY FPVHDAEGGR
GAVILMGPEA GLPMTAAMEL QMIAIHVYNR LAEIGSVWKN TNTVLSEREI QCLNWTAAGK
TSSEIAGILG LSEHTVNHYL NHVTKKLDAV NRTQAVVKAM KKGYIS
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