| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0434 |
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| Symbol | |
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| ID | 5321268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 470311 |
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| End bp | 472035 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640789369 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_001326126 |
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| Protein GI | 150395659 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.325257 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.619807 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACA AGAAAAAAGA ACTGAGAAGC CGTCATTGGT ATGGTGGCAC GCACAAAGAC
GGCTTCATTC ATCGTTCCTG GATGAAGAAC CAGGGCTTTC CCGATCATGT TTTCGACGGA
CGGCCGATCA TCGGCATCTG CAACACCTGG TCGGAGCTCA CGCCCTGCAA CAGCCATCTG
CGCATTCTTG CCGAAGGTGT GAAGCGTGGC GTTTGGGAAG CGGGAGGCTT TCCGGTGGAG
TTTCCGGTGT CGTCGCTCGG GGAGACGCAG ATGCGCCCGA CCGCGATGCT CTTCCGCAAT
CTGCTCGCAA TGGACGTCGA AGAGGCGATC CGCGCCTATG ACATCGACGG GGTCGTGCTG
CTCGGCGGCT GCGACAAGAC CACCCCGGGC CAACTGATGG GCGCGGCCTC GGTCGATCTC
CCGACGATCG TGGTGTCCTC CGGCCCTATG CTGAACGGCA AGTGGAAGGG AAAGGACATC
GGCTCGGGCA CGGATGTCTG GAAATTCTCC GAAGCCGTGC GCGCCGGTGA AATGAGCCTG
CAGGAATTCA TGGCCGCCGA AAGCGGCATG TCGCGTTCGC CGGGTGTCTG CATGACCATG
GGCACCGCGA CCACTATGGC TTCAGTCGTG GAAGCCATGG GCTTATCGCT GCCGACAAAC
GCCGCCCTGC CCGCAGTCGA CGCTCGCCGC ATGGCGCTCG CGCATATGAC CGGCAAGCGC
ATCGTCGAAA TGGTGCATGA GGATCTGAGG CTGTCGAAGA TCCTGACGAA GGAGAACTTC
GAGAACGGCA TTATCGCCAA TGCCGCCGTG GGCGGCTCGA CCAACGCGGT AGTACACATG
CTGGCGATCG CCGGGCGTGC GGGTATCGAT CTCTGTCTTG AGGATTTCGA TAGGGTGGGC
GGCCAGGTGC CTTGCATCGT CAACTGCATG CCATCGGGAA AGTATCTGAT CGAAGATCTC
GCTTATGCGG GCGGCCTGCC CGCCGTGATG AGTCGTATCC AGCACCTGCT TCATGCCGAC
GCGCCAACCG TTTTCGGCGT TCCGATCAGT AAATACTGGG AGGGTGCAGA GGTCTATAAC
GACGACGTCA TCCGCCCGCT GGACAACCCG CTGCGCGCCG CGGCCGGCAT TCGCGTCCTG
AAGGGCAATC TCGCGCCCAA CGGCGCGGTG ATCAAGCCGT CGGCAGCGAG CGAACACCTT
CTGACCCACG AAGGACCCGC CTTTGTCTTC GAGACAATCG AAGACCTTAG GGCCAGGATC
GACGATCCTG ACCTGCCGGT GACCGAAAAC ACGATCCTCG TTCTCAAGGG TTGCGGCCCG
AAGGGATATC CAGGCATGGC CGAGGTCGGC AACATGCCGA TTCCGCGAAG GCTCGTCGAA
AGGGGCGTGC GCGACATGGT ACGCATCTCG GATGCACGCA TGTCCGGCAC CGCTTTCGGC
ACGGTGGTTC TCCATGTAAG CCCGGAAGCC GATGCGGGCG GCCCGCTGGC GATCGTCCGG
ACCGGAGACC TGATCCGTCT CGACGCAATG AAGGGCGAAT TGAACCTGCT CATCGGCGAG
GAAGAGCTGG CGGCCCGCAT GGCGGCCTGG CGGCCGCCGG AAAAGAAATG GCAGCGAGGC
TATTACAAAC TCTATCACGA CACCGTGCTG CAGGCCGACA AGGGTGCCGA CCTCGATTTC
CTCGTCGGCA AGAGCGGCAG CGAGGTGCTC CGTGAAAGTC ACTGA
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| Protein sequence | MSDKKKELRS RHWYGGTHKD GFIHRSWMKN QGFPDHVFDG RPIIGICNTW SELTPCNSHL
RILAEGVKRG VWEAGGFPVE FPVSSLGETQ MRPTAMLFRN LLAMDVEEAI RAYDIDGVVL
LGGCDKTTPG QLMGAASVDL PTIVVSSGPM LNGKWKGKDI GSGTDVWKFS EAVRAGEMSL
QEFMAAESGM SRSPGVCMTM GTATTMASVV EAMGLSLPTN AALPAVDARR MALAHMTGKR
IVEMVHEDLR LSKILTKENF ENGIIANAAV GGSTNAVVHM LAIAGRAGID LCLEDFDRVG
GQVPCIVNCM PSGKYLIEDL AYAGGLPAVM SRIQHLLHAD APTVFGVPIS KYWEGAEVYN
DDVIRPLDNP LRAAAGIRVL KGNLAPNGAV IKPSAASEHL LTHEGPAFVF ETIEDLRARI
DDPDLPVTEN TILVLKGCGP KGYPGMAEVG NMPIPRRLVE RGVRDMVRIS DARMSGTAFG
TVVLHVSPEA DAGGPLAIVR TGDLIRLDAM KGELNLLIGE EELAARMAAW RPPEKKWQRG
YYKLYHDTVL QADKGADLDF LVGKSGSEVL RESH
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