Gene Smed_0433 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0433 
Symbol 
ID5321267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp469319 
End bp469957 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content62% 
IMG OID640789368 
ProductPRC-barrel domain-containing protein 
Protein accessionYP_001326125 
Protein GI150395658 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.173009 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.857282 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAGA GACTTATATC TTCCGTTGCG GCTGGCGCGC TTCTCGTGGG CGTTGCCGTT 
GCACCGATGA GCTTCGCACA GGAAACCACG ACGCCGCCGG CTACGGCACC TGAAACGCAG
ACCATGGAAC CGGCGGCCCC GGCTCCTGCT ACGCCGCCGG CCGCTGATGA GCAGGCGCAG
ACGCCGGATA CGGCAGACAA GACAACCGAT ATGGCAGCGG GCGACGCCAG CTACCTGACG
GAGCAGGCGG AGAACCAAGT ATCCGCAAAC ACCTATATCG GCCAGTCTGT CTATAATGCC
AGCGATGAAA GCATCGGCGA AATCAACGAC CTGATCATGG AGAAGGAAGG CGGCATCGCT
GCTGCCGTGG TCGGAGTCGG TGGCTTCCTC GGGATCGGGG AAAAGAACGT CGCTGTACCG
TTCGAGAAGA TCACGGTCGC CGACCAGCCC GACTCGGATG AGATCAAGCT GACGACCACG
GAAACGGCCG AATCGCTCAA GGCCGCACCC GAGTTCAAGA CGAAATCGCA GGTGATGGCC
GAGCGTAATG CCGACCAGCC AGTGGATACG TCGACAACTT CGGCAACGGG CACGACGCCG
GCTCCGGCGC AACCCGCCGA ACCGGCACCG CAGCAGTAA
 
Protein sequence
MKERLISSVA AGALLVGVAV APMSFAQETT TPPATAPETQ TMEPAAPAPA TPPAADEQAQ 
TPDTADKTTD MAAGDASYLT EQAENQVSAN TYIGQSVYNA SDESIGEIND LIMEKEGGIA
AAVVGVGGFL GIGEKNVAVP FEKITVADQP DSDEIKLTTT ETAESLKAAP EFKTKSQVMA
ERNADQPVDT STTSATGTTP APAQPAEPAP QQ