| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0430 |
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| Symbol | |
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| ID | 5321264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 465277 |
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| End bp | 466626 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640789365 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001326122 |
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| Protein GI | 150395655 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.97576 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATTGC GGGAGCTCGG ACTCGATCGG CCGAATCGGG AAAAGCCGCG CAGCGCGTCA
TTCGTCGATC CGTTGACGGG GCTCGGCAAC GCAGTCCACC TTGAGCAAAC GGTCTTTACC
CTCGCGGCGG AACGCGCAAA CGATCCTGCC CCTTTTACCA TCGCCCTTGC CAATCTGGAT
GGCTTCAAGC CGATCAACGA TCTCTTCGGA CCCGAGGCGG GCGACCAGAT TCTGCGCCAG
GTGGCGCACC GGCTGAAGGT CTGCGTTCCG GAGGGAGCGA CGGTGACCCG TACCAAGGAT
GACGAATTCG CAATCGTTTT GCCGCTTGTC TTTGAGCGAA GGAGTGCGGA GAAGCGCGGC
CAGATGCTCA AGGAAGCGCT CTCCTCGCCC TTCGCGCTTG GCGACCGGAA CGTCCGCCTG
TCGGCCTCTT TCGGCTTTGC TGTCTATCCT TTTGCCGGAG ACACATTCGA CGACTTGGTG
AAGAGCGCCG ACACGGCGCT CTACCGCTCG AAACGGCGCG GCCGCGGCCA GATCACTGTC
TATTCGCAAG AGATCGCCCA GGAGATGAAG CACGCGACAC AGCTCGAGCA GGCGCTGCGG
AACGCGATCA TCGCCGGCGG GATCGATGTC CATTTCCAGC CGATCGTTGA CCTGCGCAGC
GATCGGCCCT TGGGCTTCGA GGCCTTGGCG CGGTGGTGCG ACGCGGACCT CGGCTATGTC
TCGCCCGCGG TATTCGTGCC GTTCGCGGAA GAGCGGGGTT TCATCGACCG ACTTGCGGAA
ACACTTCTGC GCAAGGCGGC CCGGGCGGCC CTGTCCTGGC CCGAAGAACT CTTTCTGTCT
TTCAACCTCT CCTCGGTCCA ACTGATGGAT CCGACGACGA GTGCTCGCCT CCTGGCGATC
ATAGCCCAGG TGGGCCTCGA TCCACGTCGC CTCGAACTCG AAATCACCGA GACGGCCGCG
ATGGCGGATG CCGAGATCGC CCAGAGAATC ATCACCGAAT TCCGGGCGGC TGGCGTGCGC
GTGTCGCTCG ACGATTTCGG AACGGGGCAG TCGAGCCTCG GGCGGCTCAG GGACTTTTCG
CTCGACAAGG TGAAGATCGA CCGTGCGTTC GTTTCCGGGA TTTCGTCCGA CCGGGCTTCA
GAACATATCG TCAAAGCAAT CGTTTCAATG TGCGAGGGGC TGGAACTCGC CGTCGTCGCC
GAGGGCATCG AGCACGCATC CGAGGCGTTG AAGCTCAAAT CCCTCGGCTG CGGCATGGGA
CAAGGCTATT TCTTCGGCAA ACCCGCCGAT GCGGATGCCA CCATGCGTTA CTTGTCTGAG
TTCTATCGGG ATATTGCGGG GGTGCGCTGA
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| Protein sequence | MTLRELGLDR PNREKPRSAS FVDPLTGLGN AVHLEQTVFT LAAERANDPA PFTIALANLD
GFKPINDLFG PEAGDQILRQ VAHRLKVCVP EGATVTRTKD DEFAIVLPLV FERRSAEKRG
QMLKEALSSP FALGDRNVRL SASFGFAVYP FAGDTFDDLV KSADTALYRS KRRGRGQITV
YSQEIAQEMK HATQLEQALR NAIIAGGIDV HFQPIVDLRS DRPLGFEALA RWCDADLGYV
SPAVFVPFAE ERGFIDRLAE TLLRKAARAA LSWPEELFLS FNLSSVQLMD PTTSARLLAI
IAQVGLDPRR LELEITETAA MADAEIAQRI ITEFRAAGVR VSLDDFGTGQ SSLGRLRDFS
LDKVKIDRAF VSGISSDRAS EHIVKAIVSM CEGLELAVVA EGIEHASEAL KLKSLGCGMG
QGYFFGKPAD ADATMRYLSE FYRDIAGVR
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