| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0429 |
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| Symbol | |
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| ID | 5321263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 463541 |
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| End bp | 465280 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640789364 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_001326121 |
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| Protein GI | 150395654 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0784] FOG: CheY-like receiver |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.422258 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGATG TGGCGTCGGA CGGCGCAGAC ATCAGCAGGA ACATTCTGGA GGCAAGCGGC
GAAGCGCTTG GCGCCGCCTT GCTCGTTTTC GACCGGGACG ACACCATCAT CTTTGCGAGC
GCCGCAATAG TGCAATTCTT CCCCGTGCCC GCCGCCATGC TGCTGCCTGG AACGCAGCTG
CGAAGCTTCC TTGGCGCGGT CTACGATACG GGCGTGCGTC CCGGAACCTT GCCGGAGTCC
AGCCGGCACC GGCCGAATCG CGAGGAGTGG ATCGCCGAGC AGATGGCGCT TCACTGGCGG
GAGCGTTACG AAAACGTCGA GCGGGCCGGC CGCACACGCT GGCTCTTTCT GCGTCAGCGG
CGCCTGTCGA GCGGCATCGG CATTCTCGCC GTCAGCGACG TCTCGGAACA GAAAAAGCGC
GACGAACATT TCCGCGCCGA TCTCGAGCGG ATCACACTGA CACAAGAGAT ACTCCATGCT
CAGCCCAATC CCATATGCGT CAAAGACCGC AGCCTCAACT ACATCGCCGT AAACAGAGCC
TTCTGCGCCA TTCACGACCT ATCCCCCGAC GCCATGCTTG GACGCTCGGC AGCGGACCTC
CTGGGACCTG AGGTTGCGGA GCACTTCGAT CGCTCGGATC GTCACGTCCT CGAGACAGGC
ACGTCGCACT CTGAAGCTGA GCACATCGTT CGGGCTGACG GCAGCGACCT TTGGGTGGTG
ACGCGCAAAT ACCGCGTCGG ATTGCCAGGC CGCCATTTCC TGGTCACCTG CATGAATGAC
GTCACCGATA TCGCCGTCTG GTACGACGGC TCGGAAAAGG GCGGAGATAC CGGCCTGCAG
ATCCGTGACT ACAGCATCTT CACGCCAGCT CAGAATTTCT ACGATCCCTT CCGTTCGCCC
GCCGTGTCGC AACGCGTCGA TCCCGAGCCG AACGACGACG TGCCCCCGGC GCTTGGGGCG
TTGCGCGTGC TTCTGGCGAC CGCCGACGTG GAAATGGAGG AGCGCTTCGT GACGCGGCTG
CGTGGCTCCG GGCTCGACGC CTGTGCAGTC CGCAATATCG AGGAGCTCGA CGCCTTTGCG
GTCGCCGCGG AAGGCCGCGG ATTGGAGCTC GACCTTCTAT TGCTCGACGT CGCGCTTCCG
GGGAGGCACC GCGTTCTGAC CTCCTGGCGC GCCTGTACCT GGGTCGAGGT GTCGAGCGAT
ATGGATGCGA CGGTGCTGCT TGCGGAGATT TTCGGCGTCT GTGCCAATAG CACGCGTTCT
GCGCTTCCGA AATCCGAATG GGGGATGGCG TTCGACAGCG ATCCCGTGCC CGCGGCGCAA
GTCGCCATGG TGGACGTGCT CGTCGCGGAG GACAACCAGG TCAACCAGTT CGTATTCGCG
CAGATTCTGG AGGGCCTCGG CATCAGCCAT CGGATCGCGG CAGACGGAAG AGAAGCAGTG
GACCTTTGGC ATGAGCTCCA GCCCGCCCTC GTTCTGATGG ACGTGTCCAT GCCTGTCATG
AACGGCTTCG AGGCTGCTGT GGCCATACGC GAGGCTGAGA GGCCCGCGGG TCGTCGCACG
ACCATCGTGG CTGTGACTGC GCAGGCTCTC GATATCGACC TTGAGCACTG CAGGACATCG
GGAATGGACG ACCACATCAT GAAGCCGATC AGCCCGGACA TGATCGAGAT GCTGCTCCGG
AAATACCTGC CGGCAGTCGA TACATACGCT TCGGGTTCTG TCCGGAGCGG GTCGCGATGA
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| Protein sequence | MGDVASDGAD ISRNILEASG EALGAALLVF DRDDTIIFAS AAIVQFFPVP AAMLLPGTQL
RSFLGAVYDT GVRPGTLPES SRHRPNREEW IAEQMALHWR ERYENVERAG RTRWLFLRQR
RLSSGIGILA VSDVSEQKKR DEHFRADLER ITLTQEILHA QPNPICVKDR SLNYIAVNRA
FCAIHDLSPD AMLGRSAADL LGPEVAEHFD RSDRHVLETG TSHSEAEHIV RADGSDLWVV
TRKYRVGLPG RHFLVTCMND VTDIAVWYDG SEKGGDTGLQ IRDYSIFTPA QNFYDPFRSP
AVSQRVDPEP NDDVPPALGA LRVLLATADV EMEERFVTRL RGSGLDACAV RNIEELDAFA
VAAEGRGLEL DLLLLDVALP GRHRVLTSWR ACTWVEVSSD MDATVLLAEI FGVCANSTRS
ALPKSEWGMA FDSDPVPAAQ VAMVDVLVAE DNQVNQFVFA QILEGLGISH RIAADGREAV
DLWHELQPAL VLMDVSMPVM NGFEAAVAIR EAERPAGRRT TIVAVTAQAL DIDLEHCRTS
GMDDHIMKPI SPDMIEMLLR KYLPAVDTYA SGSVRSGSR
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