| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0425 |
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| Symbol | |
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| ID | 5321259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 458976 |
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| End bp | 459677 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640789360 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001326117 |
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| Protein GI | 150395650 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.523755 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.669052 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGAAGCCGA TCGCCGGCAT ATTGTTCGAC AAGGACGGTA CCCTTCTCGA TTATGTGAAG
AGCTGGGTCC CGGTGAACTA CGAACTGGCG CGGATCGCTG CCAAGGGCGA TGAGGATCTC
GCACATGTCC TCCTGCGTGC CGGCGGCATG GACCCGGATT CCGGACATGT CGTTCCCGAC
AGCCTGCTTG CGGCCGGCAA TACGGTGGAG ATTGCCACCG GCATGGTCGG CGCCGGCGCG
CCATTTACCG TGGAAGAACT GACGTCGTTG TTCGACGGAC TCTTTGCACA ATCGGCGCAC
TATGCTGTGC CCGTGACCGA CCTGGCGTCC TTTTTTGCCG GGCTGCACGC AAAAGGTTAC
CGGCTCGGCG TTGCTTCGAG CGACAACGAG CGCTCGATCC GCGAAACGGC GAAACGCTTC
GGTTTCGAGA ACTACCTGCA CTATATCGCG GGTTACGACA GCGGCTACGG AACAAAGCCG
GAGCCCGGCA TGGTGCTCGG ATTTTGTGCC GCAACTGGGC TTGCACCCGA TGAGGTGGCC
GTTGTCGGAG ACAACAATCA CGACATGCAT ATGGGCCGCA GTGCCGGCGT CGGCATGACG
GTTGCCGTTT TGACCGGCAC CGGATCGCGC CAGTCGCTCG CCGCGGCTTC CGACCATTGC
CTGGCCGACA TCACCGAGTT GGAGACGGTG CTTACCGTGT GA
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| Protein sequence | MKPIAGILFD KDGTLLDYVK SWVPVNYELA RIAAKGDEDL AHVLLRAGGM DPDSGHVVPD
SLLAAGNTVE IATGMVGAGA PFTVEELTSL FDGLFAQSAH YAVPVTDLAS FFAGLHAKGY
RLGVASSDNE RSIRETAKRF GFENYLHYIA GYDSGYGTKP EPGMVLGFCA ATGLAPDEVA
VVGDNNHDMH MGRSAGVGMT VAVLTGTGSR QSLAAASDHC LADITELETV LTV
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