| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0424 |
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| Symbol | |
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| ID | 5321258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 457632 |
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| End bp | 458951 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640789359 |
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| Product | 3-deoxy-D-manno-octulosonic-acid transferase |
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| Protein accession | YP_001326116 |
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| Protein GI | 150395649 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1519] 3-deoxy-D-manno-octulosonic-acid transferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.959798 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAGCG TGCGTGCACG GATGGCACTT GCTGGGTACC GCTGGCTTGG AACTGCCATT
TATCCCTTCT TCTGGTCCTA TCTTGCTCTG CGCGCGGCAA AGGGCAAGGA GGACCCGGCA
CGCAGGCGGG AGCGCTATGG CTATCCGAGC GCGCCGCGTC CGCAGGGTCC CCTCGTCTGG
TTCCACGCCG CCAGCGTAGG AGAGACGAAT GCGGTTACTC CGCTGATCAA GGAAATCCGT
CGTCGCGGCA TAGCCGTGGT GCTGACCACC GGCACGACGA CCTCGGCGCG GGTCGCGGCA
GAGCGATTGG GCTCGGCCGT CGTGCATCAA TACGTACCGC TCGATTTCAA GCCCGCGGTA
AGCCGCTTCC TGGAATATTG GCAGCCGGAC CTGGCGATCA TCGCCGAATC GGAAATCTGG
CCGATGACGA TCATCGAACT CGGCAGGCGC CACATTCCGC AGGTACTGGT CAATGGCCGT
CTTTCGGATC GCACTTTCGC CCGCTGGCGG CGGCGCCCGT CCTTGGCTGA TGCTCTCTTT
GAAAACCTCG CGCTCGTCAT CGCCCAGTCC GATGTGGATG CGGAGCGGTT TCGCACGCTC
GGCGCGCTCC CGGTCACCGT TTCCGGCAAT CTCAAGGTGG ACAATGAGGC TCCGCCCCAC
GATCCCCGGG ATCTGCGCGA ATACCGGCAA CAGATCGGCG CGCGAAAGAC TTGGGCTGCA
ATCTCGACCT TCGAGGGAGA GGAGAATGCG GCCGGGACGG TCCATCAGGC GCTGAAGGAA
AGAACCGGGC TGCTTACGAT CATCGTCCCG CGCCACCCGG AGCGTTGCGA TGCCATCGAG
TCGGCCCTGG TTGCCAAGGG GATGAAGGTC GCGCGCCGCA CGCGCGGCGA TCCGGTCACG
CCTGACATAG ACATTCTCCT CGGCGATACG ATCGGCGAGA TGGGGCTCTT TCTCAGACTG
ACTGAGGTCG CTTTCGTCGG ACGCTCGCTT TTCGCGGAAG GCGGGCAGAA CCCGCTGGAA
CCGGCTATGC TCGGCTGCGC CGTTCTTTCG GGCGGGAACG TTCAGAATTT CCGCGAGACC
TACCAGATGC TCGCCAAGAA CGGCAGTGCC AAGATCGTGC GCGATACGGA GATGCTGGCC
AAGGGGGTGA ACTACCTGCT TGCCAACGAC GACATGCGTC GTTCGATGAT CGACGCCGGT
CTTGAAACCG TGCAACAGAT GCGCGGCGCG CTCTCGGCGA CGATGAAAGG GCTCGAGCCT
TATATCAACC CGCTGGTAGT GAAGGCGCGG CTGGAGCCGC GCCCAAAGCC CGAAGCCTGA
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| Protein sequence | MSSVRARMAL AGYRWLGTAI YPFFWSYLAL RAAKGKEDPA RRRERYGYPS APRPQGPLVW
FHAASVGETN AVTPLIKEIR RRGIAVVLTT GTTTSARVAA ERLGSAVVHQ YVPLDFKPAV
SRFLEYWQPD LAIIAESEIW PMTIIELGRR HIPQVLVNGR LSDRTFARWR RRPSLADALF
ENLALVIAQS DVDAERFRTL GALPVTVSGN LKVDNEAPPH DPRDLREYRQ QIGARKTWAA
ISTFEGEENA AGTVHQALKE RTGLLTIIVP RHPERCDAIE SALVAKGMKV ARRTRGDPVT
PDIDILLGDT IGEMGLFLRL TEVAFVGRSL FAEGGQNPLE PAMLGCAVLS GGNVQNFRET
YQMLAKNGSA KIVRDTEMLA KGVNYLLAND DMRRSMIDAG LETVQQMRGA LSATMKGLEP
YINPLVVKAR LEPRPKPEA
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